Shewanella sp. ANA-3: Shewana3_2038
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Entry
Shewana3_2038 CDS
T00428
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
shn
Shewanella sp. ANA-3
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
Shewana3_2038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
ResIII
DUF7129
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
ABK48269
UniProt:
A0KWV0
LinkDB
All DBs
Position
2440874..2447236
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AA seq
2120 aa
AA seq
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MSKKSISLTNLYTAISSVSVDAVLNQLNFRHDSLRAYLRSVLSSQMRHNDGFLAEPVIEA
TFGWHSSERSLNDLTKQGELSARLVKCMDGAFAPDTEKQKSEDSKMGKSRLGYATDIDED
YTWPENRAPYTHQLEAWNLLSQDTPRSTVVTSGTGSGKTECFLVPLLNDLAKQVESHDEV
LVGVQAIMLYPLNALINSQQERLSAWTRGFEGKIRYALYTGETKHTAPPKATRVFKTHKP
EKVEYRDDIRNAPPPILVTNSTILEYMLVRPVDREILTKSQGKLRWIILDEAHTLVGTQA
AEISLLLRRTMIAFNVKPEHVRFIATSATIGDSKDWIRTEKLLKEFLSGLAGVSPEQVSV
VRGTRYIPKIPDDTDIEGKISIPDLEKLNSADAYQKLCQIPLMRILRQRLIQSPMTVSEI
AKTVYTEREQLEALHAQNAMKLIDIATNAYPDGNPSLEPFFPVRAHIFHRAQRGLWACVN
PNCCHKTGSELEQGWPFGRVFVSERQKCLDGCSSPVYELTHCAVCKEPSLAASLVIDSHG
NRVLLSREHDDLDEYSDEIEDNQEIDVILEHKTRNNVQIFSSQSSDLERYKSFGSSVEAY
LDLSTRRVKTRSENTLAVRYTTADRDSYLRCACCDATEAVASSTFKRALLGAPFLMGNLV
PELLRHIPRKNDDSLFGARLITFTDSRQGTARFSAKLQLDSERKWCRSKIYREIAMRSSD
SELYNDPQIATFNKILDSNPEAATKDFILSQIKIRLEELKKVSFKLNWVAAVELLANTDE
IRLMAGDLDVEDYMLPGEYSNRDQRLENTKHLAELFLLREFARRPKNANNLETLGLVKIV
YPALDSITEEDLRVGCREWGTLGLNLDDWKSYLKIILDFYVRENTLIDIHSYQVNWMGGK
LFARLLQGPEFEGKSEEEKKAIWAFPSVNKGNQHKLVRMLELFSKRSAKDNPELFNGILR
FAWRTLINKEILQHYKDGNKEWREGYHLKLSNSASFELITNASVCPITNRWLDTSFRGIS
PYLTSKTEIEDCLVKNTNCKIPHPAPDLLQSNSSQSLRNWIRHNEFILNMKKQGIWRDIT
DAALLPPVMLRSAEHSAQQYTDNLKLFEKAFKKDFLNVLNCSTTMEMGVDIGSLVMVAMN
NAPPSTANYLQRAGRAGRRGESTSIVFTFCKSTPHGERIFANPKWPFETPIPVPKVALES
VTIVHRHINAFLLSRYLNTKFSKENLPTLKSGKFFTSDTGTAIYERFMSWLSSEAVDDKY
ISQCLRMMIVGSGLAGQAEASLVHKTLQTIEEASSHWRRRWDSLCAEIQKVSEDDTGAKR
RLIKQKESMEKDSLLSELTSRGFLPGYGFPVNVVELVTNNKMEKAKEAHSYPSRGLATAI
REFSPGSDIVLNGAVYRSMGLQLSWKVPQSQYDLSKVQKLRNAVSCQECGFCQLDIISNQ
ELKSCPDCGSNRLKTMEYIVPDGFKVDYKTPLHNDYTQPLYAPYTEPLISITDTTWQALC
RHELGRFKVSDAAELFYYNNGNGGGYALCWSCGRMEPLAVNSSEGRTFLDLKSQVRLLTR
EKHPRLSGTSIDGNADCIKSDWSIKVSSSSLQDGLLQIPFVLGFSSVTSMFELQIRDPKT
HEWIFDRKLLFSFGAALRQVYCARKGISTSELGISVHQRKTASSESESVCSLFIFDTAEQ
GAGYASSIPEVLAELFKDVYEYASECPSACDAYCHACLLDYDTQHHVEYLDRKWLVQFFE
ETKFHLLFEVEPSRACFGERSIPELSSIDQLLSIKGRSSLGIDLFVSASDWDLAEVSVLS
KLHDLKGIPIRLLLGNAAIQTLTPNLAWQLRSKIPSQVEISSYELPKEISAGSFPLLRMK
FTDGDYWYATDDQRKISCNAQWGSSEGASLVAAKPMAVDLKTSPFNLEDLALKSELTSNI
ALIDDITTKLNVPFNRFGSSIFALFEEIIPRFKNVFDQGIENVTYTDRYLISPISLGLII
SIFAHVKAIMGIRDFEIITCHPSAAGDRKPYCIADNFSNIDEVNDFIDSVCSTYGINVYP
EFASKNDIDHGRCLTFTLKNGEVVRFLFDQGMGYWATRRPYSRIKFDFESVGAFDINSWC
FKVESSGGNSYIVVHKGRSC
NT seq
6363 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaaaagcatttccctaaccaatttgtatacagcaatttcatcagtgtctgtc
gatgcggttctcaaccaattaaatttcaggcatgacagtttgcgagcttatctacgctca
gtcctctctagtcaaatgcgccacaatgatggatttttagcagagccagtaattgaagca
acatttggttggcattcatctgagcgatccttgaacgatttgactaagcagggagagtta
tcagcacggttggtaaagtgtatggatggtgcttttgcgccagatacggaaaaacaaaag
tctgaagattcaaaaatgggaaaatcccgtcttggatacgcgacagacatagatgaagac
tatacctggcccgaaaatagagctccttatactcatcagttagaggcgtggaatctcctc
tcacaggacactccgcgttctacagttgttacttcagggaccggttcaggaaagactgaa
tgctttttggttccattacttaatgatttagccaaacaagttgaatctcacgatgaagta
ctagttggggttcaagcaataatgttgtatccccttaatgcattaattaattctcagcaa
gagcgtttaagtgcatggactaggggatttgagggaaagataaggtatgcactttacact
ggcgaaactaaacatactgcaccacccaaagcgaccagagtttttaaaacacacaagcct
gaaaaagtcgagtatagggatgatataagaaatgcacctcccccaatattggtaactaac
tcaacaatacttgagtacatgcttgttcgcccagttgatcgtgaaatcttaacaaagtct
caagggaagctgcgctggattatcttagatgaggctcataccttggttgggacgcaggca
gcagaaatatcgctgttgttacgtcggacgatgatagcttttaatgtaaaacctgagcac
gtaagatttattgcaacttcagcaaccatcggtgactcaaaagattggattagaacagag
aagttactcaaagaattcctctctgggcttgccggagtgagccctgaacaagtatctgtg
gtgcgtggtactcgatacattcctaaaattcccgacgacactgatattgaaggcaaaatt
tcaattccggatttagaaaaattaaatagtgcagatgcataccaaaagctctgccaaatc
cctctaatgcgcattttacgccaaagactaattcaatctcctatgacagttagcgagatt
gcaaaaacggtatatacagaacgggagcaattagaggccctgcacgcacaaaatgctatg
aagttaattgatattgcaacaaatgcataccctgacggcaatccaagtcttgagcctttt
tttcctgttagagctcacatatttcatcgcgcccaaagaggcttatgggcgtgtgttaac
cccaattgttgtcataagacggggagtgagctagagcagggatggccattcggaagagtg
tttgtttcagagcgacaaaagtgcttggatggctgcagttcaccagtgtacgaattaacg
cattgtgcagtctgtaaagaaccttctcttgcggcctcattggtcattgactcacatgga
aatcgagttttgctatcacgagagcatgatgatttagatgagtattcggatgagattgaa
gataatcaagaaatcgatgtaattcttgagcataagactcgcaacaatgtgcaaatattt
agctcccaatcgagcgatttagaacgatataaatccttcggaagctcagtcgaagcttat
ctggatctgagtaccagaagagtcaaaactcgttctgaaaacacccttgcggttaggtac
acaacagcggatcgtgactcatatctccgttgcgcatgctgtgacgctacggaagcagta
gcaagttcgacttttaagagagctcttcttggtgcgccttttttaatgggaaatcttgtc
cccgagttattgcggcatatcccaaggaaaaatgatgattcgttgttcggtgctcgttta
ataacttttacggatagccgacaaggaacggcaagattttctgcaaagttgcaactagat
tctgagcgtaagtggtgtcgttcaaaaatctatcgcgaaattgcaatgcgaagctctgat
tccgaactgtataacgacccccaaattgcaacattcaacaagattcttgatagtaatcct
gaagccgctactaaggattttattttatcgcagataaaaataaggcttgaagagttaaag
aaagtctcattcaaattgaattgggtagctgcggttgaactcttggcaaacactgacgaa
ataaggttgatggcaggggacctagatgtcgaagactacatgctcccaggcgaatatagt
aatcgagaccaacgcttagaaaatactaaacaccttgcagaattgtttttactccgagag
tttgcgcggcggcctaaaaatgccaacaacttagaaacattaggcttggtgaagatagtt
taccctgccctagattccataactgaggaagatctgcgagttggctgtcgggaatggggc
actctaggtctcaatctcgatgattggaagagctacctaaagatcattcttgatttttat
gtcagagaaaacacgctaattgacattcactcttatcaagtgaattggatgggcggtaaa
ttatttgcacgccttctgcaggggcctgagtttgaaggcaaatccgaggaagagaaaaaa
gctatttgggcttttccatcggtgaacaaggggaaccaacataagctggttcgtatgctc
gagttatttagcaaaaggtcagctaaagacaacccagagcttttcaacggaatcctcaga
tttgcgtggcgtactctaattaataaagaaatactgcagcattacaaggatggaaataaa
gagtggcgtgaaggctaccacctaaagctgagtaactcagcatcctttgaattgataaca
aatgcatccgtgtgtccaattactaaccgatggttagatacgtcatttcggggaatatcg
ccatatttaaccagtaagactgaaatagaagattgcttggttaagaatacgaactgcaag
attcctcatccagcccctgatttgttgcaaagcaatagctcgcaatcgcttcgcaactgg
atacgccacaatgagtttattcttaacatgaaaaagcaggggatctggagagatatcact
gatgcggcacttttacccccagtcatgcttcgttctgcagaacactcagctcaacaatac
actgacaatttgaagctttttgaaaaggcatttaaaaaagattttttgaatgtccttaat
tgttcaacaacgatggaaatgggtgtagatattggttcgctagtcatggtagcgatgaac
aatgctccgccatcgacggcaaattacctgcaacgcgctggacgcgctggccgacgaggt
gagagtacctctatcgtattcacgttctgtaaatctacgccgcatggtgaaagaattttt
gcaaacccgaagtggccatttgaaacgcccattccagttccgaaggttgcacttgaaagt
gtgactattgttcataggcacattaacgcattcctcctatctcgctatctaaataccaag
tttagcaaagagaatctgccaactttgaagtctggaaaattcttcacttcggatacaggt
actgcaatttatgagcgttttatgagctggttatccagtgaagctgttgatgataaatac
attagccagtgcttgcgcatgatgattgtagggagtggattggcgggacaagcggaagca
tctcttgtgcataaaacattgcaaaccatcgaagaagcgtcaagccattggcggaggcgt
tgggactcactttgtgcagaaattcagaaagtaagcgaagacgacaccggagccaaaagg
cgtttgattaaacagaaagaatctatggagaaagattcgctattgagtgaactaacctca
agaggatttcttccaggctatggtttcccggtaaacgttgttgaactggttactaacaat
aaaatggaaaaagcaaaggaggctcacagctacccatcaaggggactggccacagcgata
agggagttctctccagggagtgatatcgttttaaacggtgccgtatatcgttcgatgggc
cttcaattgtcttggaaagtgccacaaagccagtatgacctatctaaggttcagaaattg
cggaatgctgtgagctgccaagaatgcggcttttgtcaattggacattataagcaatcaa
gagctaaaaagttgtccagactgcggttccaataggctcaagacgatggagtatatcgta
cccgatggatttaaagtcgattataagacgccacttcataacgattacactcaaccactt
tatgcgccatatacagaaccgttaatttccataacagacacaacctggcaggcgctatgt
cggcacgaattaggacgctttaaggtctccgacgcggcagagcttttttactacaacaat
ggcaatggtggtgggtatgctctctgttggagttgtggccggatggagccattggcagtc
aatagtagtgaaggtcgtacttttttagatctgaaaagtcaggtgagattacttactcga
gaaaagcatcctaggttgtctggtacgtcaatagatggaaatgctgactgtattaagagt
gattggagcattaaagtcagttcttcaagtttacaagatggattattacaaattcctttt
gttctcgggttcagcagtgtaacaagtatgttcgagctacaaattagggatccaaaaact
cacgagtggatatttgatcgtaagctcttgtttagtttcggtgctgccttaagacaagtt
tattgtgcaaggaaggggatttccacgtctgagcttggcatttcagtccatcaaaggaaa
acagcatcttccgagagtgaatcagtttgtagcctttttattttcgatactgcagaacaa
ggtgcagggtatgcatcgtcaatccctgaggtattggcagagctttttaaagatgtctat
gagtacgcgtcagaatgtccatctgcttgtgatgcatattgtcacgcatgccttttggat
tatgacacacagcatcatgtcgagtatttggaccgaaaatggttagttcagttttttgaa
gaaacaaagtttcatttgttatttgaggttgaaccttctcgagcatgctttggagaacgc
tcaattcctgagctcagcagtattgaccagctactatcaatcaagggtaggtcgtcatta
ggaatagatttgtttgtgtctgcttctgattgggatctagctgaagtttcagttttatct
aaacttcatgatttgaaagggataccaattcgtttgctgttaggtaatgcggcgattcaa
acactgacaccaaatttagcttggcagcttaggtctaaaattccatctcaagtggagatc
tcatcttatgaattacccaaggagatttcggccggctcgttcccgttattacgaatgaaa
tttaccgatggtgattattggtatgcaaccgatgatcagagaaaaatctcttgtaacgct
caatggggctcgtcggaaggagcatctttagtcgcggcaaaaccaatggctgttgatcta
aaaaccagccctttcaacttggaagacttggcattgaagtctgagctaacaagtaacatc
gcgctgatcgacgacattacgacaaagctgaatgtcccattcaatcgatttggcagttcg
atatttgcgcttttcgaggagataataccgcgcttcaagaatgtgtttgatcaaggcatc
gagaatgtaacttatacagacagatacctgataagcccaataagtttaggcttgatcatc
tctatttttgctcatgttaaagcaattatggggataagggattttgagatcattacatgc
catccgagcgctgctggtgataggaaaccatactgcattgcggataacttcagcaatatt
gatgaagttaatgatttcatcgactcggtttgtagtacatacggaattaacgtatatcca
gagtttgcttccaaaaatgacatcgatcatggaaggtgcttgacgtttacactcaagaat
ggagaggtggttcgatttttatttgaccaaggaatggggtattgggcaactcgccgtcca
tacagtcggatcaaatttgatttcgaaagtgtgggggcgtttgatattaattcttggtgt
tttaaagttgagtcaagtggtggcaatagctacattgttgtacataaagggcggagctgt
taa
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