Shewanella sp. ANA-3: Shewana3_2446
Help
Entry
Shewana3_2446 CDS
T00428
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
shn
Shewanella sp. ANA-3
Pathway
shn03030
DNA replication
shn03430
Mismatch repair
shn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Shewana3_2446
03430 Mismatch repair
Shewana3_2446
03440 Homologous recombination
Shewana3_2446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shn03032
]
Shewana3_2446
03400 DNA repair and recombination proteins [BR:
shn03400
]
Shewana3_2446
Enzymes [BR:
shn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Shewana3_2446
DNA replication proteins [BR:
shn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Shewana3_2446
DNA repair and recombination proteins [BR:
shn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Shewana3_2446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_5
AAA_16
PIF1
AAA_14
ResIII
TsaE
AAA_18
AAA_assoc_2
RCF1-5-like_lid
AAA_2
nSTAND3
Adeno_E1B_55K_N
Motif
Other DBs
NCBI-ProteinID:
ABK48675
LinkDB
All DBs
Position
1:complement(2932751..2935873)
Genome browser
AA seq
1040 aa
AA seq
DB search
MSYQVLARKWRPATFEQMVGQSHVLHALTNALTQQRLHHAYLFTGTRGVGKTSLARLFAK
GLNCEKGVTASPCGVCGSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTRGRF
KVYLIDEVHMLSRSSFNALLKTLEEPPKHVKFLLATTDPQKLPVTVLSRCLQFNLKSLTQ
QEIGTQLQHILTQEQLPFEHEALTLLAKAANGSMRDALSLTDQAIAFGGGTVMLNQVQSM
LGSIDEQHVLRLLKALTDADIGVLMQSCAQVLAYGADAQEVLRSLLELLHQITLTQFAPA
AAQQSLYSAQIQAFAEQLAPEQVQLYYQILLTGRKDLPHAPDPKSGLEMALLRAVAFVPE
KPVKRWQVEDAAKVSLPAQQPTSTTPASNMPVVEQAVNQAVAEKKTPLTAERDSQTLPQA
AISEPMAKSENTTASQQALSAEDMLAVDDAIDDEAELNAALIAEQQVILSQAHSQGFGAN
AETVSRTEALSTPEAKVDSSAESNSVSMPASNIDAEHNQAATVDTASVDQGPSPATLTEP
VALSLDDIEEKTQASVNENADAVAPDEYSAEDYGQYNYAAAPLDAYQDDYSQFMAEEQGG
FSGMEESSFNRDSAQSIDHRDVVHKSAADPKSQSFVDNSASTASQASTPPASTTVSLEDD
DILSAVLAARDSLLSDLDALSTKEGDGKKPAAEVKLKTPSQNAHTAPVSHATSQNTPSVD
ASIKPQVANNASDNEFELPFDDDFEAELHLESQSNVTPTPPLDPNDRPPWEEAPVAAMDE
THAPAASVNLQTESPVAAQTAVEHLGAAPVAAQISPTDREATRVVQALEQAAGQESEPAT
QSPEPNTPQQPQAKELTQPKTQPQTQQPASVQSQSSETVQPTSSTALALAQSITGHPLDL
HWYKLMASLEIGGRVRQLAVNSICQVQANPLPLLLKPDQKHLAAPVAIEQLEQALTAALG
NPRQVEVVIGTDPARETPLEMRKRFHQELLQQARQSLMMDDNVQWLINRFGAELDQDTLL
YPPELLAQRSGLIPALPEPE
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatcaggtgttagccagaaaatggcgccctgccacattcgaacagatggtcggc
caaagccacgtgttgcacgcgctcacgaatgcgttaacgcaacaacgtttacaccatgct
tatctttttacgggtactcgcggtgtgggcaagaccagtttggcgcgtctcttcgccaaa
ggcctcaactgtgaaaagggcgtaacggcttccccctgtggtgtgtgtggcagctgtgtc
gaaattgcccagggccgctttgttgacttgatcgaagtcgatgccgcttcgcgcactaaa
gtcgatgacacccgtgaactcttagataatgtgcaatatcgtccgacccgtggccgtttt
aaggtctacctgattgacgaagtgcacatgctctcccgcagcagttttaatgcgctgcta
aaaaccctcgaagaaccgccaaagcatgtgaagtttttgctggcgacaaccgatccgcaa
aagctgcctgtgactgtgttatctcgctgcctgcaatttaacttaaagagcttaacccag
caggaaattggcactcagctacagcatattttaacccaagagcaattgccctttgagcac
gaagccttaacgctgctcgccaaagcggccaatggcagtatgcgtgatgccttaagtttg
accgatcaggccattgccttcggtggcggcacggtaatgctcaaccaagtgcaatctatg
ctgggcagcatcgatgagcagcatgtgctgcgcttactcaaagccttaaccgatgccgat
attggcgttttaatgcaaagctgcgcacaggtgctcgcctatggcgcggacgcccaagaa
gtgctgcgcagtttactggaattattgcatcaaattactttgactcaatttgcacctgct
gcggcgcagcaatccctttacagcgcgcaaattcaggcttttgccgagcagttagcgccg
gaacaagtgcagttgtattaccagattttactgactggccgtaaagacttaccccatgcg
ccagatcctaaatcgggccttgaaatggcgctgctccgagccgtggcatttgttcccgaa
aagcctgtgaaacgttggcaagttgaagacgcagcaaaggtgagcttgcctgctcagcag
ccaacgtctactacgcccgcatcaaatatgcctgtggttgaacaggccgttaatcaggct
gtggctgaaaaaaaaactccgctaaccgctgagcgtgactcacagactctgccacaagct
gcaatctctgagcctatggctaagagtgagaacactacagcttcgcaacaagccttatct
gctgaggatatgttagctgtcgatgatgcgattgatgatgaggctgaactgaatgccgca
ttaattgccgagcagcaagtgatcttaagccaagcccatagccaaggctttggcgcaaat
gccgagacggtatcgcgtactgaggccctctcaactccagaagcaaaagttgactcaagc
gctgaatcgaactcagtttctatgccggcatcgaacattgatgcagagcataatcaagct
gcaacagtagatactgctagcgttgaccaggggccttctccagcgacattaacagaaccc
gtagccttatctcttgatgatatcgaggaaaaaactcaagcgagtgttaatgagaatgct
gatgcggtagcgccggacgagtattccgctgaagattacggtcaatacaattatgccgcc
gcgccgctcgatgcctatcaggatgattattcacaatttatggctgaggagcagggcgga
ttctctggcatggaagagagttcgtttaatcgcgacagtgctcagtctatcgaccatagg
gatgttgtgcataagtccgccgcggaccccaaatcgcagtcttttgtcgacaattcagct
tcaacagcttctcaggcttcaacacctccagcttcaactacagtgtccctcgaggatgac
gatattttatcggcggtattagctgcgcgtgactccttgttatccgatcttgatgcgctc
agcaccaaggaaggtgatggaaaaaagccagcagcggaagttaagcttaaaaccccgagc
cagaatgcgcataccgcgccagtctctcacgcgacttcacaaaacacgccttcagttgat
gcatctatcaagccgcaagtcgccaataacgcgtccgataacgagtttgagctgcccttt
gatgatgatttcgaggccgagctccatcttgagtcacagtcaaatgttacgccaactccg
ccgcttgatccgaacgatcgcccgccatgggaagaggcgccagttgctgcgatggatgag
acccatgcgcccgctgcaagtgttaacctacagactgaatcccctgtcgcggcgcaaaca
gctgttgagcatttaggcgctgcgcccgttgccgctcaaatatcgccaacggatagggag
gctacacgggttgtgcaagcgttagagcaagcggctggacaagaaagcgagcctgcgacg
caaagccctgagccgaatacgccgcagcagcctcaggcgaaggaacttacacaaccaaaa
actcaaccacaaactcagcaaccagcatcggtgcagtcacagtcaagcgagactgtacaa
ccaacgtcatccactgcattagcgctggcgcaatcgattacagggcatcccttagacttg
cattggtataagcttatggcgagcctagagattggtggccgtgtgcgtcagttggcggta
aactcgatttgtcaggtgcaggctaaccccttgccgttgctgctaaaacccgaccagaaa
catttggcggcgcccgtggcgattgagcagttagagcaagctctgacggccgcattgggg
aacccgaggcaggttgaggtggtcataggaacagatcccgcgcgggaaacccccttagag
atgcgtaaacgtttccaccaagagttactgcagcaggcgcgccaatcgctaatgatggac
gataatgtgcaatggctgattaaccgttttggcgccgagctggatcaggatactttactc
tatccaccagaattgctagcccagcgtagtggacttattcccgcactgcctgagcccgag
taa
DBGET
integrated database retrieval system
