Shewanella sp. ANA-3: Shewana3_2584
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Entry
Shewana3_2584 CDS
T00428
Name
(GenBank) lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
shn
Shewanella sp. ANA-3
Pathway
shn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Shewana3_2584
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shn02000
]
Shewana3_2584
Enzymes [BR:
shn01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Shewana3_2584
Transporters [BR:
shn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Shewana3_2584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_22
AAA_16
AAA_29
nSTAND3
ABC_ATPase
RsgA_GTPase
APS_kinase
AAA_25
NB-ARC
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ABK48811
UniProt:
A0KYE2
LinkDB
All DBs
Position
complement(3087442..3089244)
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AA seq
600 aa
AA seq
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MTASPKDEMWKVFKRLLGYLKPMKGMFLLSVVGLIVYGLVDAAFISFIGPFIDKGFSSAP
AISNGIALPTSQGFHADNQVLLMAPIVVILMFSLRGFANFVSTYGISYMSARLIMDMRQQ
VFEHYLSLPVSYMDKENTGNLISKVTFDTEQIARASGSALISIVRDGVTVIGMLALMFYN
SWKLSLCILVIGPIMGLVITIVSRRFRKVSKQIQTAMGDVSAATEQMIKGHKNVLAFGGQ
ETETARFAKVNDRNRHQNMKLAVAQAISQPLIMVIGSFALAFVLYAASLDSMKADLTAGT
FATILGAMMAMLQPIKNLTRVNAEFQRGIAACTTVFELLDTLPESDTGTYTVKRAKGNLR
FDNVSFSYDGQERRALDNIDFEVTQGQTLALVGRSGSGKSTIASLVTRFYTGLESGDILL
DDVSIYDYSLKSLRNQVALVSQQVTLFNDTIANNIAYAYPGEATREQIIQAATLAHAMEF
IEQLPEGLDTQVGENGVLLSGGQRQRIAIARAMLRDAPVLILDEATSALDTESEKAIQQG
LDNLRQNRTSVVIAHRLSTIESADQILVVDQGRIVERGTHKSLLELGGMYAKLYQMQFGS
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgacagcatctcctaaagacgaaatgtggaaagttttcaaacgattactgggctacctc
aaaccgatgaagggcatgtttttgctttcagttgtcggcctgattgtatatgggcttgtc
gacgcggcctttatttcttttatcggtccttttatcgataaaggcttttccagtgctcct
gcgatcagtaacggtatcgcactccccactagccaaggcttccatgccgataaccaagtg
ttattaatggcaccgatagtggttattttaatgttttccctgcgcggttttgcgaacttt
gtctccacctacggcatttcttacatgagtgcgcgtttgatcatggatatgcgtcagcag
gtgtttgagcattatctaagcttgcccgtgagctacatggacaaagaaaacaccgggaac
ttgatttcaaaagtcaccttcgataccgaacaaattgcccgcgcatcgggtagtgccttg
atctccatcgtacgtgatggggtgacggttatcggtatgcttgcgctgatgttttataac
tcttggaagctttccctctgtattttagtgattggcccaattatggggttggtgatcact
attgtcagtcgccgcttccgtaaggtatcgaaacaaatccaaacggcgatgggcgatgtc
agtgccgccaccgagcagatgatcaaaggccataaaaacgtcttggccttcggcgggcaa
gaaaccgaaacggcgcgttttgccaaagtgaatgacagaaaccgtcatcaaaacatgaaa
ctcgccgtggcgcaggccattagccagccgctgatcatggtgattggctcctttgccttg
gcctttgtgctgtatgcggcgagcctcgatagcatgaaagccgatttgaccgcaggtacc
ttcgcgaccatccttggcgctatgatggccatgctgcaacctatcaaaaacctcacgcgt
gtgaatgccgaatttcagcgcggtatcgcggcctgtaccacggtctttgaattgttagac
actttgcctgaatccgatacggggacttataccgtcaagcgtgctaagggcaacttacgt
tttgataatgtgtccttcagctacgacgggcaggagcgccgcgccttagataatatcgat
ttcgaggtcacccaagggcaaaccttggccttggtcggacgttctggctcgggtaaatcc
actatcgccagtctggtgacacgtttctacactggcttggaatctggcgacattctgctc
gatgatgtcagcatctatgattactcattgaaatcattgcgtaatcaagtagcacttgtg
tcgcagcaagtgacgttgtttaacgataccattgctaataacatcgcctatgcctatccc
ggcgaagcgacccgcgagcagattattcaagcggcgaccttggcccatgcgatggagttt
atcgagcaactgcccgaaggtttagatacccaagtgggtgaaaacggcgtgttattatcg
ggcggtcagagacaacgtatcgcgattgcccgcgctatgctgcgcgatgcgcctgtgctg
atcctcgatgaagccacctcagcactcgataccgaatctgagaaggcgattcagcaaggg
ctggataatcttcgtcaaaaccgcacctcggtcgtgattgcccaccgtttgtcgaccatt
gaaagtgccgatcaaattttagtggtcgatcaaggtcgtatcgttgagcgcggtacccat
aaatccctgctggaacttggcggcatgtatgccaagttataccaaatgcagtttggtagc
taa
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