Shewanella sp. ANA-3: Shewana3_2612
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Entry
Shewana3_2612 CDS
T00428
Name
(GenBank) Exodeoxyribonuclease I subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
shn
Shewanella sp. ANA-3
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shn03400
]
Shewana3_2612
DNA repair and recombination proteins [BR:
shn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Shewana3_2612
Archaeal homologous recombinant proteins
Shewana3_2612
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
ABK48839
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All DBs
Position
1:complement(3118622..3119824)
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AA seq
400 aa
AA seq
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MRFIHTSDWHIGRQLHNQSLLEDQAYVLDQIVTLAEQHSVDAVIIAGDIYDRSIPPASAV
ALLDEVLNRLITELGLQVLLIAGNHDGHERLGFAAKQMAASGLHIIGPLQADLTPIRLTS
PSGDAYFYLLPYAEPATVRQVFEAEANGLSVSSHEEAMTLLLELVRSHDSQGLPKVVVSH
CFLDGGSESESERPLNIGGADKISPRLFSEFDYVALGHLHGPQYKGCEHVRYSGSILKYS
FSEQHQHKSVTLVDVAAQTPAQIQLLPLTALRDVRIIEGELAHLLDLGKTDAKREDYLMV
RLLDKHAILDAMGKLRSVYPNVLHLERTGLMAGEQAVTLNRDHIKKGEMAMFRDFFSQVS
GEALSDAQQAVMDEILTKLHRDEGDSVGSTRVKAKGEQSA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgagatttatccatacctcggactggcacattggccgccagttacacaatcaatcactc
ttagaagaccaagcctatgtgcttgatcagattgtgacattggcagagcagcactctgtc
gatgcggtgattattgccggggatatttacgataggtcgattccacctgccagcgccgtg
gctttgctcgatgaggtgcttaatcgccttatcacagagttagggttacaagtactgctg
attgccggtaaccacgacgggcacgaacgcttaggctttgcggccaaacaaatggcggca
agtggtttgcacattattgggccactgcaggctgatttaacgccgatccgcttaaccagc
ccaagtggcgatgcttacttttatctgctgccttacgccgaacctgcaaccgtgcgccaa
gtatttgaggcggaagctaatgggcttagcgtatccagtcatgaagaggcgatgacgcta
ctgttagaactagtccgcagccacgacagccaagggttacctaaagtcgtggttagtcat
tgctttttagatggcggcagtgagtccgagtccgagcggccattgaatattggtggtgcc
gataaaatctccccacggctttttagtgagtttgactatgtggccctcggccacttacac
ggaccgcaatataaaggttgcgagcatgtacgttattccggctcgattttgaaatattcc
tttagcgaacagcatcaacacaagtcagtcactttagtggacgttgcagcgcaaactccg
gcgcaaatccaactcttgcccttaacggcgctgcgcgatgtgcggattatcgaaggggaa
ttggcgcatttattagatcttgggaaaaccgatgctaagcgtgaggattatctgatggtc
agactcctcgataaacacgccattttagatgccatgggcaaactgcgcagtgtctatccc
aatgtgctgcatctagaacgcacaggattaatggcgggcgagcaggccgtcacactcaat
cgtgaccatatcaaaaaaggcgaaatggccatgttccgtgattttttcagccaagtctct
ggcgaggcgctgagtgatgcgcagcaagcggttatggatgagattttaactaagcttcac
agggatgaaggggatagcgttggatctactcgcgttaaagccaaaggggagcaatccgca
tga
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