Shewanella sp. ANA-3: Shewana3_2682
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Entry
Shewana3_2682 CDS
T00428
Name
(GenBank) transcriptional regulator, CdaR family
KO
K02647
carbohydrate diacid regulator
Organism
shn
Shewanella sp. ANA-3
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shn03000
]
Shewana3_2682
Transcription factors [BR:
shn03000
]
Prokaryotic type
Helix-turn-helix
Other families
Shewana3_2682
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
HTH_8
GAF
Motif
Other DBs
NCBI-ProteinID:
ABK48909
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All DBs
Position
1:3206661..3207893
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AA seq
410 aa
AA seq
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MYVLDQHIAKQIVSRTMKIIGHNINVMNGQGVILGSGDPKRIGSTHEGALLAIAQNRNVE
LSEEVASGLYGVKPGINLPLHYQGQIIGVIGITGDPAELTHYGELLKMTAEMIVEQANQQ
DQQQWENRQREEFILQLIKAQTDDDEQLHRWAKQLDIDISLPRVAAIIEVSEKQSAPTQH
TSAAFSSLVQSEQNADERNPRVSEILKQVLHLLQNPDRGNLIAMTSMSQLVILKPAFLDG
KQWDPELENQRIDKLLQRLPAQMDLHFKIALGHFFPEKGGIARSYQTAQETLNLGKQLNP
EGTKYLFEDYSLQVLLSGLKHDWRGQALASPYQQLAKADKNGQLRKTLAAYITHFGDAQQ
CANALFIHRNTLRYRLDKIQQLTKSDIHSLHGLLSLYLGQLIDTSNYRLE
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtacgttttggatcaacacatcgctaaacaaattgtgagtcgcaccatgaaaatcatt
gggcacaatatcaatgtgatgaatggtcagggcgtgatcttaggttcgggcgatcccaaa
cgtattggctcgacccacgagggcgcgctgcttgccatcgcccaaaaccgcaatgtggaa
ctgagtgaagaagtggcctctggcttatatggcgtcaaacccggcatcaacttacccctg
cattatcaagggcaaattattggggtgattggtattactggcgatccggccgagttaacc
cactacggcgagctgctcaaaatgaccgccgagatgattgtcgagcaagccaaccagcag
gatcagcagcagtgggaaaatcgccagcgtgaggaatttattctgcagttgattaaggcg
caaaccgatgacgatgaacaattgcatcgctgggccaagcaactcgacatcgatatcagt
ctgccgcgagtggccgccattattgaagtcagtgaaaaacaatccgcgcctacccaacac
acatccgccgcgttttcgtcattagtccagagcgagcaaaatgcagacgagcgtaacccc
agagtcagcgaaatcctcaagcaagtgctgcatttgctgcaaaaccccgatcgcggcaac
ttgattgccatgacctctatgtcgcaactggtgatcttaaaacccgcctttctggatggt
aaacaatgggatcccgagcttgaaaaccagcgtatcgataaactgctgcagcgcttaccg
gcacagatggatttacattttaaaatagcccttgggcattttttccctgaaaaaggcggc
attgcccgctcctaccaaaccgcgcaggaaaccttaaacttaggcaaacagcttaacccc
gagggcacaaaatacctgtttgaagactactccttgcaagtgctgttatcgggactcaag
catgattggcgtggtcaggcgctggccagcccctaccaacagctagccaaggccgataaa
aatggccagctacgtaagactttagccgcctatatcactcactttggtgatgcccagcaa
tgtgctaatgcattgtttattcaccgaaataccctaaggtatcggttagataaaattcag
caactcaccaagagtgatatccattctctccacggattgttaagtctttatcttgggcag
ttgatagatacctcaaattaccgactcgagtag
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