Shewanella sp. ANA-3: Shewana3_2840
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Entry
Shewana3_2840 CDS
T00428
Name
(GenBank) beta-ketoacyl synthase
Organism
shn
Shewanella sp. ANA-3
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
PP-binding
Ketoacyl-synt_C
KR
Acyl_transf_1
KAsynt_C_assoc
adh_short
PKS_DH_N
ApeI-like
Motif
Other DBs
NCBI-ProteinID:
ABK49067
LinkDB
All DBs
Position
1:3386332..3394206
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AA seq
2624 aa
AA seq
DB search
MSHTPSQPQLSTDEKADKRLNKRLKDMPIAIVGMASIFANSRYLNKFWDLICDKIDAITD
VPESHWSIDDYYDADKSKADKSYCKRGGFMPEVDFNPMEFGLPPNILELTDSSQLLSLVV
AKEVLQDANLPDDYDRDRIGITLGIGGGQKLSHSLNARLQYPVLKKVFKSSGLSDEDSEL
LIKKFQDQYVHWEENSFPGSLGNVIAGRIANRFDLGGMNCVVDAACAGSLAAMRMALTEL
TEGRSDMMITGGVCTDNSPYMYMSFSKTPAFTTNEQIQPFDIDSKGMMIGEGIGMVALKR
LDDAERDGDRIYAVIKGVGASSDGKFKSIYAPRPEGQAKALERAYDDAGFAPHTVGLIEA
HGTGTAAGDVAEFNGLTSVFSKDNEQLQHIALGSVKSQVGHTKSTAGTAGVIKAALALHH
KVLPPTINVSQPNPKLNIAHSPFYLNTEARPWIQRSDDTPRRAGISSFGFGGTNFHLVLE
EYRPEHARDDAYRQRSVAQSWLFTAADKTALLGELKTALQQATAAKAELSQAHFVAFAKS
YALRELPPQSARLGFIAKDYVQLQALLTQAIAQLESNSAESWQLPTGISFRAQALVKDNH
KVAALFAGQGSQYLNMGLEIANNFPELRRHIHTSDKVFSDRGEATLSSVLYPIPAFDDES
RKAQESALTNTLYAQSAIGALSMAQYALLTQAGFAPDMLAGHSFGELSALCAAGVISVDD
YIKLAFERGLAMAQSPQDADSSSDAGVMYAVILKQKQDIEAIKESLAQFDGVKIANYNSP
TQLVIAGATTATQQAAKAIGELGFKAIALPVSGAFHTPLVAHAQKPFSEAIDKAQFNTPK
IALYANGTGELHPTDANAIKAAFKDHMLQSVHFSKQLEAMYAAGARVFVEFGPKNILQKL
AENTLAAQLNELCLISINPNPKADSDSQLRSAAVQLAVAGVKLGEIDPYQAELIAPATPS
AMNIKLNATNYISPATRNKMVDSLQSGKITSRVQYVDRIVEKVVEKVVEKPVIVEKILEK
VVEVEKPVAQNSNTIQQQTPAQPASFTAGQANQDALSAFFAAQTQAAQLHQQFLAIPQQY
GDTVSALMAEQAKMASLGIAIPESLQRSMELFHQHQAQTLKSHAEFMQLQTSSSQAALAL
LGQKPAPQVQAPIQTAAPVAVAVATPVAPAQAPVVQALAAEPKATVVPVSEPKVQQPQVT
QQVAQPQVQTVAAATRALSEKPVVQQIETAMMAVVADKTGYPVEMLELGMDMEADLGIDS
IKRVEILGTVQDELPNLPELSPEDLAECRTLGEIVALFSQALPVTAVTASPQSITQSAVA
ASAAVSNDEIERTMMAVVADKTGYPVEMLELSMDMEADLGIDSIKRVEILGTVQDELPKL
PELSPEDLAECRTLGEIVALFSQATPVTAITASPQSITQTAVATNAAVSNDEIERTMMAV
VADKTGYPVEMLELSMDMEADLGIDSIKRVEILGTVQDELPKLPELSPEDLAECRTLGEI
VALFSQATPVTAATTVSHATQNALLASAVAASAAVSNDAIERTMMAVVADKTGYPVEMLE
LGMDMEADLGIDSIKRVEILGTVQDELPKLPELSPEDLAECRTLGEIVALFSQATPVTAA
ASVSYATQSAVASSAAVSNDEIERTMMAVVADKTGYPVEMLELSMDMEADLGIDSIKRVE
ILGTVQDQLPNMPELSPEDLAECRTLGEIVALYAGSQSSSESQQQNHAAPIQEAIAETVE
DTIDLPPHSEVMLKKLPAAAELARIIATSDVQLTANSYVVIGDDGHNAGVIAEKLHAQGV
KVAVVRSPKTVVTSASPLDSHIASFTLEAIDDESICEVINQIEALGQIAGFIHLQPQHKS
VADKGAGLVLADEAKASVEQAFLFAKHLQPLLTERDHCRFVTVSRIDGGFGYIGMDESAG
ALISQSELNQAALSGLTKTLNHEWPGVVCRALDIAPNLDAKTVANAVVQEYYLQDAPVEV
GIDSELERATLVAGNAVLRRSGASLSSADKILVTGGAKGVTFECALSLAKRCKAHFILAG
RSAHQAIPAWAQGKNRNELKAAAIAHLQSLGDKPTPKQVDALVWPVQSSLEISHALQAFE
AVGASAEYLSLDVNDPAAIASTIAPISALSPITGIIHGAGVLADKHIQDKTLSELERVYG
TKVTGLNNLLSALDLSQLTLIALFSSAAGFYGNTGQSDYAMSNDILNKAALQLAQQLPQA
KVMSFDWGPWDGGMVNPALKKMFIDRGVYVIPLKAGAELFASQLLSDTGAQLLVGTDMQG
NTANAVEAASAKKPEADLTTALDPQPMAQTVPQSIRVMRSLDPKRMSFIEDHCINGHAVL
PTVCAIDWMREAAKAHLGKAVSVSDYRLLKGIIFDEALLARDAPIELELMLTPLADATQQ
STEALAALISFEGRPQYQAVLVAQTDDMPDAQRFEVGELHSLMEEITQQPAIANRESLYS
DGTLFHGPRLQGISEVLAFDDQQLIAKVALPALALDDCGEFAPDLEDKGTQPFAEDLLLQ
AMLVWARLKYQAASLPSAIGEFVSYSPLGFGEKAVLVLDVIKHSSRTLEANIALYHQDGR
LSCEMKRAKVTVSKTLNQAFLANKPQQPMQVQAVAQSTAEVSVK
NT seq
7875 nt
NT seq
+upstream
nt +downstream
nt
atgagccataccccttcacagcctcaattatcaaccgatgaaaaagccgataagagactg
aataaacgcttaaaagatatgccgattgccatcgtaggcatggcgagtatctttgctaac
tcccgctatttgaataagttttgggatttaatttgcgacaagattgatgccattaccgac
gtgcccgagtcccactggtcgattgatgactattacgatgcggataaatccaaggccgat
aagagctactgcaagcgcggcggatttatgccagaggtcgatttcaatccgatggagttt
ggtctgccgcccaatattttagaactcaccgacagttcacagttactctcactggtcgtc
gccaaggaagtcctacaggatgcaaacctgccagacgattacgaccgcgaccgtatcggc
atcaccctcggcattggcggtggtcaaaagctaagccatagcctcaacgcgcgcctgcaa
tatccggtgctgaaaaaagtatttaaaagcagtggcctgagcgatgaagatagcgagctg
ctgatcaaaaaattccaagatcaatatgtccactgggaagaaaactctttccccggctcc
cttggcaacgtgattgccggacgcatcgccaaccgtttcgatttaggcgggatgaactgc
gtcgtcgatgccgcctgcgccggctcgcttgccgccatgcgtatggcgctgaccgaactg
accgaaggtcgcagcgacatgatgatcaccggcggtgtctgtaccgacaactcgccctat
atgtatatgagtttctcaaagacgccggcttttaccaccaacgagcagattcaacccttc
gatatcgactctaagggcatgatgattggcgaagggatcggcatggtcgccttaaaacgc
ctcgacgatgccgagcgcgatggcgaccgtatctatgcggtaatcaaaggcgttggcgcc
tcatcggacggtaaatttaagagcatttatgcgccgcgtcccgaaggccaagccaaggca
ttagagcgcgcctatgatgacgctggctttgcgccgcacaccgttggcttgattgaagcc
cacggcacaggcacagccgcaggcgatgtggccgaattcaatggcttaacctcagtattc
tctaaggataatgagcagttacagcatatcgccttaggctcagttaaatctcaggtcggt
cacactaagtccaccgcgggcacggcgggggtgattaaagccgcattggcgctgcaccat
aaagtcttgccgcctacgatcaacgtgagtcagcctaaccctaaattaaacattgcccac
tcgcctttttatctcaataccgaggcgcgcccttggatccaacgcagtgacgatacgcca
cgccgcgcagggatcagctccttcggttttgggggcactaacttccatttagtgctcgaa
gaataccgcccagaacacgcgcgcgatgacgcctatcgccaacgcagcgtggcacaaagc
tggctgtttaccgccgccgacaaaaccgcgctgctgggcgagttaaaaaccgcgctgcag
caagcaaccgccgccaaggctgagctttctcaggcgcattttgttgcctttgcaaaatcc
tacgccctgcgtgaactccccccgcaatcggcccgtcttggctttatcgccaaggactat
gtccaattacaggctctgttaacccaagcaatagcgcagctagaatccaatagcgccgag
agctggcaactacccacagggataagttttcgcgcccaggcactggtcaaggataaccac
aaggtcgcggccttatttgcaggccaaggctcacagtacctgaatatgggactggaaatt
gccaacaacttccccgagcttcgccgccatatccacaccagcgataaagtgtttagcgac
cgtggtgaggcaacgctttcaagcgtgctgtacccaatccccgccttcgatgatgagtcg
agaaaagcgcaggaaagtgcgttaaccaataccctttatgctcaaagcgccatcggcgcg
ctctctatggcgcagtatgccctgttgactcaggcgggattcgccccggatatgctcgca
ggccatagttttggtgaactctcggccctgtgcgccgctggcgtgatttcagtagacgac
tacatcaagcttgccttcgaacgtggactggcaatggcgcagtcacctcaggatgccgac
tccagtagtgatgctggcgtcatgtatgccgttattcttaagcaaaaacaggatattgag
gctattaaagaatccctggctcagtttgacggcgtcaagattgctaactacaactcaccc
actcagttggtaattgcaggcgctaccacagcgacacaacaggccgctaaggccatcggc
gagttaggctttaaagcaattgccctgcccgtttctggcgccttccacacgccattggtt
gcccatgcgcaaaagccctttagcgaagctattgataaggctcagttcaacacgccaaag
attgccctgtatgccaatggcacaggcgagctgcatcccaccgatgccaacgccatcaaa
gcggcctttaaagatcatatgttgcaatcggtgcactttagcaagcagctagaggccatg
tatgccgctggcgcacgggtgtttgtcgagttcggcccgaaaaacattctgcaaaagttg
gcagaaaataccctagccgcgcagttaaacgagctttgccttatcagcattaacccgaat
cctaaagccgactccgacagccaactgcgcagcgcggcggtgcaactggcggtcgcaggg
gtaaaactgggtgagattgacccttatcaagccgagctgattgcgccagcaacgccttcg
gccatgaatatcaagctcaacgcgaccaactacatcagcccagcgacccgcaacaaaatg
gtcgactcgctgcaatcgggcaaaattaccagccgagtgcagtatgtggatcgcatcgtt
gaaaaagtggttgagaaagtcgttgaaaaacccgtgattgtcgaaaaaattctagaaaag
gttgtcgaagtggaaaagccagtggcacaaaatagcaatactattcaacaacaaacgcct
gcacaaccagccagctttaccgctggacaggcgaatcaagatgccctgagcgcctttttt
gcagcccaaacccaggccgcacaattacatcaacaatttttagcgatcccgcagcaatac
ggcgataccgtcagtgcactgatggcagagcaagccaaaatggcaagccttggcatcgcc
attccggagagcctgcaacgctctatggagctgttccaccagcatcaggcacaaacccta
aagagccatgctgaatttatgcaattgcagaccagcagcagccaagcggcattagccctg
ctcggccaaaagccagcgcctcaggttcaagcccccattcaaaccgcagcaccagtggcg
gtagcggtggcaacgccagtcgctccagcacaggctcccgtggttcaagcgttagccgca
gagccaaaagcgactgttgtgcccgtgagtgagcccaaagttcagcaacctcaagtaaca
caacaagtagcacaaccacaagtgcaaactgtggcagcagcaactcgcgcgctttccgag
aagccagtcgtgcagcaaatcgagaccgccatgatggcagtggttgccgataaaacgggt
tatcccgttgaaatgttagaacttggcatggatatggaagccgaccttggtatcgattct
attaaacgcgtggaaattctaggcacggtacaggacgagttacccaacctgccagaactg
agtccagaagatctcgccgagtgccgcaccctaggggaaattgtggcgctatttagccaa
gcgctacctgtaacagccgttacagcaagcccgcagtcaattacacaaagtgcagtagcc
gcaagtgcggcggtttctaatgatgaaattgagcgcactatgatggcggtcgtcgccgat
aagaccggctatcccgtggaaatgctggaactgagcatggatatggaagccgaccttggg
atcgattcgattaaacgcgtggaaattctaggcacagtgcaggacgaattacccaagctg
ccagaactgagcccagaagatcttgccgagtgccgcaccttaggggaaattgtggcgctg
tttagccaagcgactcctgtaacagccattacagcaagcccgcagtcaataacacaaacc
gcagtagccaccaatgcggcggtttctaatgatgaaattgagcgcactatgatggcggtc
gtcgccgacaagactggttatcccgtggaaatgctggaactgagcatggatatggaggcc
gaccttggtatcgattctattaagcgcgtggaaattctaggcacagtacaagacgaatta
cccaagctaccagaactcagcccggaagatctcgccgagtgtcgcaccctcggcgaaatt
gtggcgctatttagccaagcgactcctgtaacagctgcgaccacagttagccatgcaaca
caaaatgcactactcgcaagtgcagtagctgcaagcgcggcggtttcgaatgacgcgatt
gaacgcactatgatggcggtcgtggccgacaaaacgggctatcccgtggaaatgctggaa
cttggcatggatatggaagccgaccttgggatcgattccattaagcgcgtggaaattcta
ggcacggtacaagacgaattacccaagctgccagaactgagcccagaagatcttgccgag
tgccgcaccctaggcgaaattgtggcgctctttagccaagcgactcctgtaacagctgct
gcctcagttagctatgcgacacaaagtgccgtagcctcaagcgcggcagtttctaatgac
gagattgaacgcactatgatggcggtcgttgctgataagactggctatcccgtggaaatg
ctcgaactgagcatggatatggaagccgaccttggtatcgactccatcaagcgcgtggaa
attttaggcacagtacaagatcaactgccgaacatgccagaactgagccctgaggattta
gccgagtgtcgaaccttgggtgaaattgtcgccctgtatgctggttcgcaatcgtcaagt
gagtcgcaacagcaaaaccatgctgcgccaattcaagaggcaattgcagaaacagttgag
gacaccatcgacctgccgccccatagtgaggtgatgctaaaaaagttgccagcggcggct
gagttagcgcgcatcatagcaactagcgatgttcaactgacggcaaacagttacgtcgtt
atcggcgacgatggccacaacgcgggggtgattgccgaaaagcttcacgcccaaggcgtt
aaggtcgcggttgtacgctcaccgaaaacagttgtgaccagcgcatcgccactcgatagc
catattgccagcttcacgctggaggcgattgatgatgaaagcatttgtgaggtcatcaat
cagattgaagcgcttggccaaatcgccggttttattcatctgcagccacagcataagtcc
gttgccgataaaggtgctggcttagtgctggcagacgaagccaaagcttcggtcgagcaa
gccttcttgtttgccaagcacttacaaccgcttttaacggagcgcgaccactgccgcttt
gtcaccgtcagccgtatcgacggcggctttggctatatcggtatggacgagtcggcaggc
gctcttattagccagagtgaactcaaccaagcggcgctctctggactcactaaaacctta
aatcacgagtggccgggagtggtctgccgcgcactggatatcgcgccaaacttagatgcc
aaaacggtcgccaatgcggtagtgcaggaatactacctccaagatgcgccggtcgaagtc
ggtattgatagcgagcttgagcgagcaaccttagtcgcgggcaatgccgtacttcgccgc
agtggcgcgtctctctcgtctgcggacaaaatcctcgtcacaggcggcgctaagggcgtt
accttcgagtgcgccttaagtttagcgaaacgctgcaaggcccattttatcctcgcgggt
cgcagcgcccatcaagcaattcccgcttgggctcagggtaaaaatcgcaacgagctgaaa
gccgcggccattgcacatctgcaaagcctgggtgataaacccacaccaaaacaagtggat
gccttagtttggccagtacaaagcagccttgaaatcagccatgccttgcaggcctttgaa
gcagttggcgccagcgccgaatacttaagcttggatgtgaatgacccggcagctattgcc
agcactattgcgccaatcagcgccctatcgcccatcacggggattatccacggcgcgggt
gtacttgccgataaacatattcaagacaaaaccttaagcgaacttgaacgtgtttatggc
actaaggtgaccggacttaacaatctgctgtcggcactggatcttagccagttaacgctc
atcgccctgttctcttcggcggcgggtttttacggcaatactggccagagcgactatgcc
atgtctaacgacattctcaataaggctgcgctacaacttgcgcagcaattgccacaggcc
aaggtgatgagctttgactggggtccttgggatggcggcatggtcaatcctgcgctgaaa
aaaatgtttatcgaccgcggggtttatgtcattccactcaaagccggtgccgagttattt
gccagccaattattgagtgatacaggggcgcagctgttggtcggaaccgatatgcagggc
aataccgccaatgctgttgaagctgcatcagcaaaaaagcctgaagcggatctaaccacg
gcgttagatccgcagcctatggcccaaactgtgccacagagtattcgcgtcatgcgcagc
ctcgaccctaaacgcatgagctttattgaggatcattgcatcaatggtcatgcggtattg
ccgacggtgtgcgccatcgattggatgcgtgaggctgccaaggcccatttaggtaaggcg
gtgagtgtcagcgattatcgactgctcaaggggatcatcttcgatgaggcgctgcttgca
cgcgatgcgcctattgagctcgaattgatgctcacgccgcttgctgacgctacacaacaa
tcgactgaggcgttagccgcgctgatcagctttgaaggtcgcccgcaataccaggcggta
ttagtggcgcagacggatgatatgccagacgcgcagcgtttcgaggttggcgagttgcat
tctctgatggaggagataacgcagcaacccgctatcgcgaatcgcgagtcgctctacagc
gatggcacgctgttccatggcccaagactgcaaggcataagcgaagtgctcgcctttgat
gaccagcagcttatcgctaaggttgcactgccagcgttggccttggacgactgcggcgag
tttgcgccagatcttgaggataaaggcacacaaccctttgccgaagatctgttattgcag
gccatgctcgtgtgggcgcgccttaaatatcaagcggcaagcttacccagtgccattggc
gagttcgtgtcctattcgcccttaggttttggcgagaaggcggtattagtgctggatgtt
atcaagcattcgtcccgaacacttgaagccaatattgccctctatcatcaagatggccga
ctaagctgcgagatgaaacgggccaaggttactgtcagtaagacgctcaaccaagcgttt
ttggccaataaacctcagcaaccaatgcaagtgcaggcagtcgcccaaagcacggccgag
gtaagtgttaagtga
DBGET
integrated database retrieval system