Shewanella sp. ANA-3: Shewana3_2881
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Entry
Shewana3_2881 CDS
T00428
Name
(GenBank) putative exonuclease, RdgC
KO
K03554
recombination associated protein RdgC
Organism
shn
Shewanella sp. ANA-3
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shn03400
]
Shewana3_2881
DNA repair and recombination proteins [BR:
shn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Shewana3_2881
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RdgC
Motif
Other DBs
NCBI-ProteinID:
ABK49108
UniProt:
A0KZ89
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All DBs
Position
3445737..3446651
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AA seq
304 aa
AA seq
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MWFKNLTLYRFNKPFSIETEALETALADFTFSPCGSQDVSKFGFSNALGKQGSTLVHSAN
NRHLICVTKEEKILPGQVIKESLEEKVAQIEDEENRKLAKKEKDALKDEIITSLLPRAFS
RRSQTRALILPELEMILVDSSSATKAEELLALLRKALGSLPVIPLSFKAPVEANLTQWLK
DGSAPLPFEMQDEAELKSAADEGGIVRFKQQDLKEDEVLAHLETGKEVHKLALHFGQSIA
LLLQSDASVKRLKFSEEFRAGNDELGNEDPMARLDADFALMGSELVALMHALVSALGGLE
ETQA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgtggtttaaaaatcttactctttaccgtttcaataaacctttttccatcgaaacagaa
gcacttgaaaccgcactcgccgatttcacattctctccgtgcggcagccaagacgtcagc
aaatttgggttttccaatgccttaggtaaacagggcagcaccttagtgcacagcgccaac
aatcgtcaccttatctgtgtgacgaaagaagaaaaaattctgccaggccaagtgattaaa
gaatcattagaagaaaaagtggcgcaaattgaagacgaagaaaatcgtaagctcgccaaa
aaagaaaaagatgcgctgaaagatgaaatcatcactagcctattaccgcgcgccttttca
cgtcgcagccaaactcgcgcgctgattttacctgagctggaaatgatcctcgtcgacagc
tctagcgccactaaggccgaagaattgttagccttattacgtaaggccttaggcagcttg
cctgtgatcccattaagctttaaagcgccagttgaagccaacctcactcaatggttaaag
gatggcagcgcgcccttaccctttgaaatgcaagatgaagccgagttgaaatcggccgcc
gatgaaggcggtatcgtgcgctttaagcagcaagatcttaaagaagatgaagtacttgcc
cacctcgaaacaggcaaagaagtacacaagctcgccctgcactttggccaatcgattgcg
ctactgctgcaatccgatgccagcgtaaaacgcttaaaattctccgaagaatttagagcg
gggaatgatgagctggggaatgaagatccaatggcgcgcctcgatgccgactttgcctta
atgggcagtgagttagtagctctaatgcacgcactagtttcggcattaggtggccttgaa
gagactcaagcttaa
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