Shewanella sp. ANA-3: Shewana3_2919
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Entry
Shewana3_2919 CDS
T00428
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
shn
Shewanella sp. ANA-3
Pathway
shn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Shewana3_2919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shn03400
]
Shewana3_2919
Enzymes [BR:
shn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Shewana3_2919
DNA repair and recombination proteins [BR:
shn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Shewana3_2919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
Viral_helicase1
HHH_RecD2
UvrD_C_2
SH3_13
AAA_22
AAA_11
PhoH
PIF1
TraI_hel_assoc_N
UvrD-helicase
Helicase_RecD
AAA_16
Herpes_Helicase
nSTAND3
AAA_14
DUF6469
AAA
RsgA_GTPase
AAA_28
SLFN-g3_helicase
T2SSE
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ABK49145
UniProt:
A0KZC6
LinkDB
All DBs
Position
1:3495433..3497598
Genome browser
AA seq
721 aa
AA seq
DB search
MNTALHEDQMRVTSIPYRSTKMVIFSGVPLAKDSYKTNSGKYFVTIKADPDSIPVLPTLG
QHWSVKGARQIESVEMGDYVMQQHTYESPKHIECTLPETGEQLIRFIARESDFKGIGESK
ARALWQLLGKDFHATLKNDTPESRKRLTSILSEDSVEALFKGYAKYKNLAHCNWMSEHNI
PASVQQRLLKHHGEASIEVIKDNPYALMGFGLSFSAIEDIIKVTDFKSYVAKDDPRRLSA
ALEMAIRKEIEKGHTYTTHANVRPYLNNLLKDKTLVTQAFKSGHDKAQYILNPDTGAYHP
TAQLLMESVVAKRLNTLIKRNDLFDENANAAYCSAVAELPYELTPKQIEAVTTCLDNSVS
CITGGAGTGKTTVLRTALRAYHQLGFEIHAVALSGRAAMRLHESIGFVTSTIAKLLREAP
IEPCVEKTNHLLVIDEASMIDLPTMYRLVNHIHPSVRLIFTGDPDQLPPIGCGKVLADIV
EAKTVANTMLDIVKRQEGSTGIPEYSKLINQGVMPDRLSTGAIHFHETSKTDIAKVCCEL
YQQCPENSRVMAPTKALVSEINKLTQQAVNPDSTSLEFEINGDKFFLPLRMNDAVLFTQN
HYDKGIQNGSLGMLTNAKPSGDSYGEVTLDTGEKVEITQSVLDCMELGYAITLHKAQGSQ
FPRIIIALQNGRIVDRAWFYTAITRAESEIHIVGSSDDMKQITEAPSHSHKRNSYLKELL
S
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaataccgctttgcatgaagaccaaatgcgtgtaaccagtattccctatcgctcgacc
aagatggtgatattcagcggtgtgccgctggccaaagactcttacaaaaccaatagtggg
aagtatttcgtcaccatcaaagccgaccccgatagcatcccagtgcttccaacgctgggt
cagcattggtcagtcaaaggtgctcgccagatagaaagtgtggagatgggtgattatgta
atgcagcagcacacttatgaatcacccaagcatattgaatgcactttacccgaaacaggt
gagcaactgatacgctttatcgccagagaaagtgacttcaagggtattggtgaaagcaaa
gccagggcgctctggcagctcttgggtaaagacttccatgccacactgaaaaatgacacc
ccagagtccagaaagcgtctgacatcgattctgagtgaagattcagtggaagcgctcttt
aaggggtacgccaaatataaaaacctggcacattgcaactggatgagcgagcacaacatc
cccgccagtgtgcagcaacggctgctcaagcatcacggtgaagcctccatagaggtaatt
aaggataatccttatgctttgatgggctttggtctttcgttcagtgccattgaagatatt
atcaaggtaacggattttaagagctatgttgcgaaggatgacccaagaaggctcagcgct
gctctggaaatggcgattcgcaaggagattgaaaaaggtcacacctataccactcatgcc
aatgtgcgcccttacctcaacaatctactgaaagacaaaacactggtcactcaggcattc
aaatcaggtcatgataaagctcagtatattttaaatcccgacacaggagcctaccatcca
acggcgcaacttctgatggaaagtgtcgttgccaaacggctaaatacactgattaagcga
aatgacttgtttgatgaaaacgccaatgctgcgtattgctctgcggttgcggagcttccc
tacgaattaactcctaaacaaatcgaagccgtcacaacgtgtctggataattcggtaagc
tgtattacgggcggtgcaggaacaggcaagacaacggtactcagaacggctctcagggca
tatcatcaacttggatttgaaatacacgccgttgcgctcagcggtcgtgctgcaatgaga
cttcatgagtccatcggttttgttacctcaaccattgccaaattgctgcgtgaagccccc
atagaaccctgtgtcgagaaaacaaatcacctactggtgattgatgaggcaagcatgatt
gacttgccaaccatgtatcgtcttgtgaatcacattcacccctctgtacgattaatattc
actggcgaccccgaccaacttccaccaatcggctgcggcaaggtgttggcagacatcgtt
gaagcaaaaacggtggctaatacgatgttagatatcgtcaagagacaggaaggttcaacg
ggtatccccgaatactcaaagctcatcaatcaaggtgtgatgcctgatcgattaagtacg
ggagcaatacactttcacgaaaccagtaaaacagacattgccaaagtctgttgtgagctt
taccaacagtgtcctgaaaacagtcgcgtcatggctccaaccaaggcactcgtatcagaa
atcaataaacttacccaacaagccgttaacccagatagcactagccttgagttcgaaatc
aatggtgataagttctttttgccacttcgcatgaatgatgcggtgttattcacgcagaac
cattatgacaaaggcattcagaacggctcacttggtatgctaaccaacgccaaaccttct
ggtgatagttacggtgaagtgacgctagatacaggtgaaaaggtcgagataacacaatcc
gttctcgactgcatggagttgggttacgcaatcaccctacataaagctcaagggtcacag
tttccacgcatcatcatcgctctgcaaaacggaagaatagttgatagagcatggttctat
acggcaatcacgagagctgaaagtgaaatccatatcgttggtagtagtgatgacatgaag
cagatcaccgaggcacctagtcactctcataagcggaatagctatctgaaagaactgttg
agttag
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