Shewanella sp. ANA-3: Shewana3_2929
Help
Entry
Shewana3_2929 CDS
T00428
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Organism
shn
Shewanella sp. ANA-3
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
5TM-5TMR_LYT
PAS_9
PAS
PAS_8
PAS_4
PAS_11
PAS_7
Motif
Other DBs
NCBI-ProteinID:
ABK49155
LinkDB
All DBs
Position
1:complement(3510732..3513761)
Genome browser
AA seq
1009 aa
AA seq
DB search
MDKSIFLPLVQNAALLLALVFLYDAIPKKHQRQYFLLWRLGIGLLIGGIGVTIMSTPWMY
EPGIIFDTRSVLLCVTGLFFGGLPTAIAVVMTAIYRISIGGAAMWVGLGVIISSGLIGVI
WRQQRKSYLANISGREIFSFAFVVHIVMLLWFFLLPDKVAIPVLQKIMLPVLTIYPLATW
LLSRLLSRRFELERDEQIRLQDDFLFRSQFNVGNIGIAITGVDQKWIKVNPRLCQMLKYS
EDELLHMTWKQLTHPDDVEADIVKFELMLAGKIDNYEMDKRFIAKDNSIVYTHMTVACKR
ANHQVLLVIAGYLDVTAQTLADREVLASREQLELVLSSSDLGVWDWDIRNDHIERNARSA
DILGCDIDMLNANSRQWMDSIVAEDRPKVLHSIEAHIRGETLQHKMEYRLKTLNRDIRWI
LDTGKVVSRDANNNALRMCGTYTDITEAKLIEESLKLSALVYDNSSEAMSVLDETGVIIT
VNAAFTAITGYSESEIRGQHIRLLYCDLNGHGFYTEMNNEIREKGEWQGEMRQRRKNNEE
YVIWLTINTIKDKDGQPYRRVALFSDITDKKQSEHLIWKQANYDTLTGLPNRRMLLEYLG
AEIKSADRNRNHFALMFLDLDYFKEVNDTLGHAMGDLLLIETASRLKSCVRDADVVARLG
GDEFTVVLSSMVDHKGIERVAEHILRRIAEPYVLGEETAYISASIGITLYPDDATSIEGL
LKHADQAMYAAKDQGRNRFNYFTPSMQEYAKYRMRLIQDLRQAVVSKEFELHYQPIVTMT
TGEVLKAEALLRWFHPERGYVSPAEFIPVAEDTGLIVEIGNWVFEQAARQSALWRKTFGV
DIQISVNKSPIQFRDEGTLLHNWLELLQKLDVTGTGVCVEITEGLLLDASMGVTEKLLAY
RDAGVQVSLDDFGTGYSSLAYLKKFDIDYLKIDQSFTRNIDTDESDQTLCEAIIVMAHKL
GMKVIAEGVETEAQRQVLLTAGCDYGQGYLFSKPVSATEFASKYLVKEA
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggataaaagcattttcttacccttagtacaaaatgcggcgttattgctcgccttggtg
tttttgtacgatgcgattcctaaaaagcatcagcggcagtattttttgctgtggcggctg
gggatcggattactcataggtggcattggcgtcactattatgagtaccccatggatgtac
gaacccggcattatcttcgatacccgctctgtgctcctatgtgtcaccggcctgtttttt
ggcggtttgcccaccgccatcgccgttgtgatgacagctatttatcggatcagcattggc
ggcgccgccatgtgggttggcttaggggtaattatttcctcaggcttgattggggtgata
tggcgccagcaacgtaaatcttaccttgccaatatctcgggcagagaaatcttcagcttt
gccttcgtcgtgcatatcgtcatgttgttgtggttctttttgctgccggacaaggttgcc
attcccgtgctgcaaaaaatcatgttacccgtgctaaccatttatcccctcgcgacttgg
ctactgagccgtttactctcccgccgttttgagctggagcgtgacgagcagatccgtttg
caggatgatttcctgttccgcagccaatttaacgttggcaatatcgggattgccattacc
ggcgtcgatcaaaagtggatcaaggtgaatccaaggctttgtcagatgctgaaatactca
gaggatgagctgctgcatatgacctggaaacagcttactcatcccgatgatgttgaggcg
gatatcgtcaagtttgagctgatgttggcgggtaaaatcgataactatgaaatggataaa
cgttttatcgccaaagataattcgattgtatatacccatatgacggtcgcctgtaagcgc
gcgaatcatcaagtgttattggtgattgcgggttacttagatgtcaccgcccagactctt
gccgatagggaagtgctcgccagtcgtgagcaactcgagctggtgttaagcagtagcgat
ttgggcgtttgggactgggatatccgtaatgatcatatcgagcgtaacgcccgcagtgcc
gatattttaggttgcgatatcgatatgctcaacgccaatagtcgccaatggatggactcg
attgtcgccgaggacagacccaaggtgctgcactccatcgaggcccatattcgcggagaa
acgctgcaacataagatggaatatcgcttaaaaaccctcaaccgcgacatccgctggatt
ttagatacgggcaaagtggtgagccgcgatgccaacaacaacgccttaagaatgtgcggt
acctataccgatatcaccgaggccaagcttattgaagaatccctaaagctgtcggcgctg
gtctatgacaacagctcagaggctatgagtgtgctcgatgagacgggggtgatcatcact
gtcaatgccgcatttaccgcgattacgggttacagcgagtcagaaattcgtggtcagcat
attcgcctactttattgcgatctcaacggtcacggcttttatactgagatgaataatgaa
attcgcgaaaaaggtgagtggcagggggagatgcgccagcgacgtaagaacaatgaagag
tacgtcatttggctcaccatcaacaccatcaaagataaagatggccaaccttaccggcgt
gtggcgctgttttctgatattacggataaaaagcagagcgagcatttgatctggaaacag
gccaactacgacacgctaacgggcttgccgaatcggcgcatgttgctcgaatatttaggc
gccgagatcaagagtgccgaccgcaatcgcaatcattttgccttgatgttcctcgatctg
gattactttaaagaagtgaacgacaccctaggccatgccatgggggatctattgctgatt
gaaaccgccagtcgcttaaaatcctgtgtgcgggatgccgatgtggtggcgcgcctcggc
ggggatgagtttactgtggtgctcagttcaatggtggatcacaaggggatagagcgggtc
gccgaacatattttaaggcgcattgccgaaccctatgtgctgggggaggaaaccgcctat
atcagcgccagtattggcattactctgtatcccgatgatgcgaccagtatcgaaggtctg
ctcaaacatgcggatcaggccatgtatgcggcgaaagatcagggccgcaatcgtttcaac
tatttcactccttcgatgcaggaatacgccaagtatcggatgcgcttaatccaagatttg
cgtcaagctgtggtgagcaaagaatttgaactgcactatcaacccatagtgaccatgacc
acgggcgaggtgcttaaggccgaagcgctattgcgttggtttcacccggagcggggttat
gtctcccctgcggagtttattcccgtcgctgaagataccgggctgattgtcgagattggt
aactgggtctttgagcaggcggcgcggcaaagtgccctgtggcgtaaaacctttggagtc
gatatccagatcagcgttaacaagtcacctatccagttccgcgatgagggtacactgctg
cacaattggctggaattactgcagaaattagatgtcaccggcacgggcgtgtgcgtcgaa
attaccgaagggttactccttgatgccagtatgggcgtcaccgaaaagctcttggcctat
cgggatgcgggcgtacaagtttccctagacgactttggcacaggttattcgtccttggcg
tatttgaagaagttcgatatcgattatttaaaaatcgatcaatcttttacccgcaatatc
gacaccgatgaaagcgaccaaaccctgtgcgaagccattatcgtaatggcccataaattg
ggaatgaaagtcatcgccgaaggggtcgaaaccgaggcgcagcgccaagtcttgctgact
gcgggctgtgactatggtcagggctatttattctctaaacccgtgagtgccacagagttt
gcgagcaagtatttggttaaagaggcttag
DBGET
integrated database retrieval system
