Shewanella sp. ANA-3: Shewana3_3005
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Entry
Shewana3_3005 CDS
T00428
Name
(GenBank) permease YjgP/YjgQ family protein
KO
K07091
lipopolysaccharide export system permease protein
Organism
shn
Shewanella sp. ANA-3
Pathway
shn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Shewana3_3005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shn02000
]
Shewana3_3005
Transporters [BR:
shn02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
Shewana3_3005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Phage_capsid_2
Motif
Other DBs
NCBI-ProteinID:
ABK49230
LinkDB
All DBs
Position
1:complement(3608810..3609922)
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AA seq
370 aa
AA seq
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MIVFRYLIREVLKAQIAVLFVLLTIFISQHFVRILADASDGEFPASLIATLIGLNLPYLV
VLVLPLSLFLGILMAHGRMYAENEMVILHGVGVSEWYVTRVTLILAVINMLFTGYLSLYV
APWAEEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNDLDKVFVAQLPD
PNDEIGLTNVVVAKGGRVLEDQNGSQQLQLNDGVRYQGSPQQKDYQMIEFGGYKMQIKEQ
QVDERRRKLSALPLTELMKVEGPEAVAEFHWRLAIPLAIPIMTLIAVPLARVNVRQGKFA
KMLPAVLLYLGYFGLMVAGRKALQDGVIPQYLGMWWIHLSALIMGILLLGKDRPLFARLS
TAMARKKVAA
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
gtgattgtatttagataccttattcgagaagttttaaaggcgcaaattgcagtacttttc
gtactgttaactatttttattagccagcatttcgtgcgcatattggccgacgcctcagac
ggtgaatttccagcttctcttatcgctaccttgataggcctcaacttaccctatcttgtt
gttctcgttttacctttaagtttgttccttgggatcctcatggcccacggccgcatgtat
gccgagaatgaaatggtcattctccacggtgttggcgtaagtgaatggtatgttacccga
gtaactttgatccttgccgttatcaacatgttgtttactggctatttatccctctatgtc
gcgccttgggccgaggagcaacaaaaccaagtgctcgagaaagctcaatccgaggcgggc
cttgccgcattagtgcaagggcgttttcaggcgagtcctaacggccgtgctgtgctgttt
gtcgaacgtatcggcaaggataacgatctggataaggtgtttgtggcccagttgcccgac
ccaaatgacgaaattggtttaaccaacgtggtcgtggcgaagggcgggcgggtactggaa
gatcagaacggctcgcagcagttacagctcaatgatggggtgcgctatcagggcagccca
caacagaaagactaccaaatgattgaatttggtggctataagatgcaaatcaaagagcaa
caggtcgatgagcgtcgccgtaaactctctgccttaccgctgactgaattgatgaaagtc
gaaggaccagaagccgtggctgagttccattggcgtttagcgattccgctggcgattcct
atcatgacacttattgccgtgccgctggcgcgagtcaatgtgcgccaaggtaaatttgcc
aaaatgctcccggcagtactgttatatcttggctactttggcctgatggtcgcgggacgt
aaagccttgcaggatggggtgatcccacaatatttaggcatgtggtggatccatttgtcg
gcactcattatggggattttactcctaggtaaagacagacccttatttgctcgtttatcg
acggcaatggcgcgtaaaaaggtggccgcatga
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