Shewanella sp. ANA-3: Shewana3_3221
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Entry
Shewana3_3221 CDS
T00428
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
shn
Shewanella sp. ANA-3
Pathway
shn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Shewana3_3221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shn03400
]
Shewana3_3221
Enzymes [BR:
shn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Shewana3_3221
DNA repair and recombination proteins [BR:
shn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Shewana3_3221
Prokaryotic type
Shewana3_3221
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABK49445
LinkDB
All DBs
Position
1:complement(3863883..3864548)
Genome browser
AA seq
221 aa
AA seq
DB search
MTVATWQEFIDYQRAQPYYQQLIAFVNQERASGKVIYPPKEDVFNAFKTTPLEKVRVVLI
GQDPYHGPDQAHGLCFSVKRGIKPPPSLANMYKELVNDIPGFQIPNHGDLTQWAEQGILM
LNTVLTVEQGQAHSHANAGWETFTTEALKLLNAQEQPIIFVLWGSHAIKKGAVITAPQHQ
ILSGPHPSPLSAYRGFFGCGHFSKVNQLLMARGEVPIQWQV
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
gtgactgtggcaacttggcaggaatttatcgattatcaacgtgctcaaccctattaccag
cagttgattgcatttgtgaatcaagagcgtgcgtcgggtaaggtgatctatccccccaag
gaggatgtgttcaacgcctttaagacaactcctttggaaaaggtgcgtgtggtacttatc
ggtcaagatccctaccatggtcccgaccaagcccacggcctgtgtttctcggttaagcga
ggcattaaaccgccgccatcgctggccaatatgtataaagagttagtgaacgatattccc
ggttttcaaatccctaaccatggcgatttaactcaatgggcagagcaggggatcttaatg
ctcaataccgtgctgacggtggagcaaggacaagctcattcccacgctaatgcgggctgg
gaaacctttaccactgaggcgttaaagctgcttaatgcgcaggagcagccgattattttt
gtactatggggcagccatgccatcaaaaaaggggcggtgattactgcgccacagcatcaa
atactgtcgggaccccatccgtcaccgctgtcagcttatcgcggcttctttggttgtggg
catttttctaaagtgaaccaactgctgatggcaaggggcgaagtaccgatccaatggcag
gtttaa
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