Shewanella sp. ANA-3: Shewana3_3298
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Entry
Shewana3_3298 CDS
T00428
Name
(GenBank) formate dehydrogenase, alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
shn
Shewanella sp. ANA-3
Pathway
shn00630
Glyoxylate and dicarboxylate metabolism
shn00680
Methane metabolism
shn01100
Metabolic pathways
shn01120
Microbial metabolism in diverse environments
shn01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Shewana3_3298
09102 Energy metabolism
00680 Methane metabolism
Shewana3_3298
Enzymes [BR:
shn01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
Shewana3_3298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Pyr_redox_2
Molydop_binding
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Fer2_4
Pyr_redox_3
NAD_binding_8
Fer4_7
DAO
Fer4
HI0933_like
Fer4_8
NAD_binding_7
Thi4
Fer4_6
FAD_oxidored
GIDA
Amino_oxidase
Fer4_9
FAD_binding_2
FAD_binding_3
Fer4_2
AlaDh_PNT_C
Fer4_21
Fer4_16
Fer4_18
Shikimate_DH
Fer4_10
Fer4_22
Fer4_Nqo3
Fer4_17
NADH-G_4Fe-4S_3
Lys_Orn_oxgnase
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
ABK49522
LinkDB
All DBs
Position
1:3947973..3952271
Genome browser
AA seq
1432 aa
AA seq
DB search
MIELKIDNHSVTAEPNDNLLQAARKAGIAIPSLCDPTDATRQLGTAPNADKQDCNLCLVQ
IENTDASLRCVKACETPAEAGLKVITQSAYLTKQRQAALSTILSDHFADCEAPCQQACPA
GVDVQSYLYHIAQGDHTQAIKVIKDTLPLPLSIGRVCPAFCESECRRGLVDDPIAIRQLK
RHAADLDLADDEQGNSYQPPRLADTGKKIAIIGAGPAGLSAGYYLSNQGHNVEIFEAMPK
AGGWLRYGIPEYRLPKAILDKEIELLCRNGLTIHTDTRLGHEIHLAQLVADFDVVCLAIG
AQKAVPMNYKGSALAGCYLGVDFLKDHCLDKQLKLGKKVAVIGGGNTAIDCARTAVREGC
DVTLIYRRTRAEMPAEAYEVHEAEVEGVKFHFLTNPIENHSDDNGRVQSVTFSKMTLGEA
DTSGRRAPVDTGETFTEAFDTVIAAVSQAPDLSFMQDPMGQLSQGELALSRWNTLIGCEQ
TMSSGVEKLFVMGDARRGPATAVAAIGDGRKAAIAIDKMLKIGLSCDLHAHAFNSVKTIP
SALIPSALKQTETSSKAGSTLYPHTPRQLRLKMPELTALQRLLNYSEVELGFPADAAMQE
AARCLECACQANTDCKLRDYATDYGVEAKSLATENARHFSVDKSAPFIQFDANRCISCGK
CVDVCQQQSGHCAIQFSQDSYQALPQEMTQHMERRAPRVGFSASMADSHCVQCGNCVQVC
PTGALVDARDKRQGDCTELKTASTICTYCGVGCRLDLKIDPNANRIRHIEGNKDSVVNQG
MLCVKGRFGFDFIHSDKRLTTPLIRKNGELQPSSWPEAIAYVAKRLTEIKQKDGSNALAS
LASAKATNEDNFVLQKFVRSVLGTNNIDHCARLCHSSTVTGLQQSIGSGAMTNDIPSIKD
SDVIFILGSDTTCAHPIIASKIQQAVMQHGARLLVADPKRVGIAEKAELYVAHRPGTDVM
LLNAIMAEIIRHDWQDKAYIAERTEGIEALYAELAKDDYSLENAALITGVKAEDIARLAR
TIGTAEKTAVYYAMGITQHTTGHDNVTAISNLQLLCGNIGVSGAGINPLRGQSNVQGACD
MGALPNYFTGYQKVTDLHARMRFENHWQTRLSGEIGVTATHMMHDIAKGKIKALYVMGEN
PVLSDPDQAHVLNALSQIEFLVVQDIFLTETAELAHVVLPAAAFVEKRGHFTNTERRVQR
LEQALASPGEALPDWQIVQAVANAMGANWDYTNEEAIWREINELTPQYRGIRWDRLSANA
EGQISQGIQWPCPDETHPGTPIMHQSQFTRGLGLFTPVSYRLPAEMPCNEYPLTLSTGRL
LEQFHTGTLTRKTPGLDLLGAPKVMISVYDAEQLGINNGDKLRLTTRRGEIEIDAFVTKR
AQAGVLFLPFHFVEAAANKLTINALDPVAYIPEYKVCAVRAEKVTARVSEPA
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atgatagaacttaaaatcgacaatcacagcgtcacggccgagccgaacgataacctatta
caggcggcccgtaaggcgggcatagccattccgagcctgtgcgacccaacggatgcgaca
cggcaattgggcacagctcctaacgccgataaacaggactgcaacctctgcctagtgcaa
atcgaaaataccgatgccagcctgcgctgcgttaaagcctgtgaaacgcccgccgaagcg
ggcttaaaagtcatcacacaatcggcatatttaactaaacagcgccaagctgcattgagc
acgattttaagtgaccactttgccgattgtgaggccccctgccagcaggcctgccctgcg
ggcgtcgatgtacaaagttacctgtaccacattgcccaaggcgaccacacccaagccatt
aaagtcattaaagacactctgccgctgccgctgtcgattggccgagtctgccccgcgttt
tgcgagagcgaatgccgccgcggcctcgtcgatgaccccattgccattcgtcaacttaag
cgccacgccgccgatttagacttggccgatgacgagcaaggcaatagctatcagccgccg
cgcctcgcagacacaggtaagaaaattgccattattggcgcgggcccagcaggcttaagc
gcgggttattacctgtcaaaccaagggcataatgttgagatatttgaagccatgcccaag
gcgggcggctggctgcgctacgggatccccgaataccgtttacctaaggcgattctcgat
aaagaaatcgagctgctgtgccgcaatgggttaaccattcatacggatactcgcctcggc
catgaaattcatttagcccaactggtcgccgatttcgatgtggtgtgcctcgccatcggc
gcccaaaaagcggtaccgatgaactacaaaggctctgcgcttgcgggctgttaccttggg
gtggattttcttaaggatcattgcctcgataagcaattgaagttgggcaaaaaagtcgcc
gtcattggcggcggcaacaccgccatcgactgcgcccgcaccgcggtgcgtgaaggctgc
gatgtcaccttaatctaccgccgtacccgcgccgaaatgcccgccgaagcctacgaagta
cacgaggcagaagtcgaaggcgtgaaattccactttttaaccaatcccattgaaaatcat
agtgatgataacggacgagtacagtcagtcacctttagcaaaatgacgctcggtgaagcc
gatacctcgggcagacgcgcgccagtagacacaggagaaacctttaccgaggccttcgat
actgttatcgccgccgtctcccaagcgccggatctgagttttatgcaggatcctatggga
caactcagccagggtgaactggcgctgagccgctggaacacgctaattggttgtgaacaa
accatgtcatcgggtgtagaaaaactgtttgtgatgggcgatgcccgccgcggcccagcg
actgccgtagccgccattggcgatggccgtaaagcggcaatcgctattgataagatgcta
aaaattggccttagctgcgatttacatgcccatgcgtttaactcggttaaaaccattcca
agcgccctcattccaagcgcccttaagcaaaccgaaacaagctcaaaagcagggtcaacg
ctttatccccatacgccgcgtcagctccgcctgaagatgcccgaactcacagcgctgcaa
cggctgctgaattacagtgaagttgagctaggttttcccgccgatgccgctatgcaagag
gcggcacgttgcctcgagtgcgcctgtcaggccaataccgactgtaagctgagggactac
gccacggattacggtgtggaggccaaaagcttagccactgaaaatgcacggcatttcagt
gtggataagagtgcgccctttattcaattcgatgccaaccgctgtattagctgcggtaaa
tgcgtcgatgtgtgtcagcagcagagtggccactgcgcgattcaatttagccaagattcc
taccaggcgctgccgcaggaaatgactcaacacatggagcgccgcgcgccgagagtcggc
tttagtgcgagcatggccgatagccactgtgtgcaatgtggtaactgtgtacaggtttgt
ccgacgggggcactggtcgatgcccgggataaacgtcagggggattgtacagagttaaaa
actgcctcaacgatttgtacttactgcggcgtgggctgccgtctcgaccttaaaatcgac
cccaacgccaatcgcattcgccatatcgaaggcaataaggactcggtcgttaaccaaggc
atgctgtgcgttaagggacgttttggcttcgattttattcacagcgacaaacgcctcact
acgccactgatccgtaaaaacggcgagctacaaccgagtagctggcccgaagccatcgcc
tatgtggcaaaacgcttaaccgagataaaacaaaaagatggcagcaatgccctcgccagc
ctcgcctcggccaaggccaccaacgaagataactttgtgctgcaaaagtttgttcgtagc
gttcttggcaccaacaatatcgatcactgcgctcgcctctgccattcatcgacggtaaca
ggcttgcagcagagtattggtagcggcgccatgaccaatgatattccgagcatcaaagac
tcagacgtcatctttattttagggtcggataccacctgcgctcatccgattatcgcctcg
aaaattcagcaggcggtgatgcagcacggggcgcgtttactggttgccgatccaaagcgg
gttggcattgccgaaaaggccgagctgtatgtcgcccatagaccgggcacggatgtgatg
ctactcaacgccattatggcggaaattattcgccacgattggcaggataaagcctatatt
gccgagcgcaccgaaggcattgaggccctctatgcagagttagccaaggacgattattcc
ctcgaaaacgcagcgcttatcacgggcgtaaaagccgaagatattgcccgcctcgcgcgg
accataggcacagccgaaaagaccgcggtttactacgccatgggcatcactcagcatacg
acggggcacgataacgtcaccgccatttctaatttgcagttactttgcggcaatattggt
gtgtcaggcgcgggcattaacccacttcgcggccagagtaacgtccaaggtgcctgcgac
atgggcgccctacccaactattttactggttaccaaaaggtcacggatcttcatgccaga
atgcgcttcgaaaaccattggcaaacacggttatcgggggagattggcgtcaccgccacc
catatgatgcacgatattgccaagggcaaaattaaagccttgtatgtgatgggtgagaat
cccgtgctcagcgaccccgaccaagcccatgtgcttaatgcattgagccaaatcgagttt
ctggtggtgcaggatatctttttaaccgagacggccgagcttgcccatgtggtcttaccc
gccgccgcatttgtggaaaaacgcggtcactttaccaataccgagcgtcgtgtacagcga
ctcgagcaggcactcgcctcaccgggtgaagccttgcccgattggcagatagtgcaagca
gtcgctaacgccatgggcgctaactgggactataccaacgaagaagccatctggcgcgaa
atcaacgaacttactccgcagtatcgcggcattcgctgggacagattaagtgccaatgcc
gaaggtcaaatctcccaagggattcaatggccctgtccagatgaaacccatcccggaaca
ccgattatgcatcagagccaattcactcgaggcttaggcttatttacgcctgtcagttat
cgcctacctgctgaaatgccctgcaacgagtatccactgacgctctcaacagggcggctg
ttggagcaattccacactggcacactcacccgtaagactcctgggctggatttactcggc
gcgcctaaggtgatgatttcggtttatgatgcggagcaactagggataaacaatggcgat
aaacttcgcctcaccacccgccgcggagagattgaaatcgatgcctttgtgactaaacgc
gcccaggcgggcgtgctgttcctgccgttccattttgtggaagcggcggcgaataagctc
actatcaatgccttagatcctgtggcttatattcccgaatataaggtctgtgcggtcagg
gcggaaaaggtgacagcaagggtgagtgaaccagcttaa
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