Shewanella sp. ANA-3: Shewana3_3630
Help
Entry
Shewana3_3630 CDS
T00428
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
shn
Shewanella sp. ANA-3
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shn02000
]
Shewana3_3630
Transporters [BR:
shn02000
]
Other transporters
Pores ion channels [TC:
1
]
Shewana3_3630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
OMP_b-brl_3
Plug
Motif
Other DBs
NCBI-ProteinID:
ABK49850
LinkDB
All DBs
Position
1:4357678..4359819
Genome browser
AA seq
713 aa
AA seq
DB search
MEDKTMAAHPSTIPHGFKCSAIASALTLALGASVTSQAMADETNQTQIERIQVHGEQSLG
RNALGSADALLKDQGVDFSEAGGVSALPVLNGMMGDRIKVLVDGADITASCANQMNPQLS
YVSANQISSVEVVAGVPPVSVGGDNIAGVIKVNSLNPKFSDSDNLNFESGEISSGYRSTS
DAFLLGAKTGIASKHLSFSYQGAYEDANSYQDGHGDKVLDTLYRAQNHALTAAWRDDTQQ
LAIKLTHQAIPFQGFPNQYMDMTDNKSYGALVRYLRDLDNDGEFSAQLNWHSVKHEMGFF
TPEKIGKMPMNTEGRDYSYQLHWRLPMGDDSTLLVGQEYYNYQLDDTWPAVPGTMMAPND
YININDGERRRAAVYGEWQQNLTPLWWLSAGVRYEYVTTDTGEVQAYSNMPMMGMPNVDA
EATKAFNAMDRSRDDNLIDATLLARYQLSAKQQLEFGLARKNRAPNLYERYSWGRGVMAT
TMIGWYGDGNGYVGNPNLKPETAHTLSAAYKFAGDEWQFSTTAWYSAVTDYIDAEVIGSF
NRTGLANGKRNILKFTNEDANLYGAKLSANYLLADTDSGKWQMQGKLDITRGERDEGNEP
LYQIKPLQTELALSHQLGDWENRLSWQWVATKDKVDERRLENETDSYSLLNLSSSIKWQE
LSLTFAINNLFDTYYELPLGGVNLAEFKADSTGGFSQVAGSGRSFELGASYKF
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaaaacgatggctgcacacccttcaactatcccccacggctttaaatgctcc
gcaatcgccagcgcgctgaccttagcattaggcgcttcggttacctcacaggccatggcc
gacgagacaaatcagactcaaattgaacgtattcaagttcatggcgagcagagtcttggc
cgtaatgccttaggctcggccgatgccttgctgaaagaccaaggcgtcgatttctccgaa
gcgggcggcgtttccgccttgcccgtgctgaatggcatgatgggcgatcgcattaaagta
ctcgtcgatggcgcggatatcaccgcttcctgtgccaaccaaatgaacccacaactttcc
tacgtttcagctaaccaaatcagctcggtagaagtggtcgcgggcgtgccccctgtcagt
gtgggcggcgacaatatcgccggggtgataaaggttaatagccttaatcctaaatttagc
gacagtgacaacctcaactttgaaagcggcgagatttcatctggataccgcagcaccagc
gatgccttcttactcggggctaaaactgggattgccagtaagcacttaagtttcagctat
caaggcgcctatgaagatgccaatagctaccaggatggtcacggcgataaagtgctcgat
accctctatcgcgcccaaaaccacgccttaacggcggcatggcgcgatgacactcaacaa
ctggcgattaagctaacgcaccaggctatcccattccaaggttttcctaaccaatacatg
gatatgacggataacaagagttacggcgccctagtccgctatctgcgagatttagacaac
gacggtgaatttagcgcccagttaaactggcacagcgtgaagcatgaaatgggcttcttc
accccagaaaaaatcggcaagatgccaatgaatacagagggtcgcgattacagctaccaa
ctgcattggcgcttacctatgggtgatgacagcacgctactcgtcggtcaggaatattat
aactatcaactcgatgatacttggccagcggtgcccggcactatgatggcgcccaatgac
tatatcaatatcaacgacggtgaacgccgccgcgccgcagtttatggcgaatggcagcaa
aacctcacgccactctggtggttgtctgccggggtgcgttatgaatatgtcaccacagat
acgggcgaagtgcaggcttacagcaatatgcccatgatgggcatgccgaatgtggatgcc
gaggcaacaaaagcctttaatgctatggatagaagccgagacgataatcttatcgacgcc
actctgttggcgcgttatcaattgtcggccaaacaacaattggaatttggcttagcccgt
aaaaaccgcgcgccaaacctgtatgagcgttacagctggggccgtggcgtgatggcaacc
acaatgatcggctggtatggcgacggtaacggttatgtgggcaatcccaatcttaagcct
gaaacggcgcacactctgagcgcggcctacaagttcgcgggcgatgaatggcaattctcg
accacggcttggtatagcgcagtgaccgactatattgatgccgaggtgattggcagtttt
aaccgtactggccttgccaacggtaaacgcaatatccttaaattcaccaacgaagatgcc
aatttatatggcgctaagttgagtgcgaactacctattagccgataccgacagcggtaaa
tggcagatgcaggggaaactcgatatcacccgtggcgagcgcgatgagggtaacgagccg
ctttatcaaatcaaaccgctacaaaccgagttagcccttagccatcaactgggtgattgg
gaaaaccgtctgtcatggcaatgggtagcgactaaggataaggttgatgagcgccgctta
gagaatgagaccgacagctattcgctattaaatttaagcagcagtattaaatggcaagag
ctgagtttaacctttgcgatcaacaacctgtttgatacttactacgaactgccattgggt
ggcgtcaaccttgccgaatttaaggccgatagcacgggtggctttagccaagtcgcaggc
tcgggtcgctcatttgaattaggcgctagctacaaattctaa
DBGET
integrated database retrieval system
