Shewanella sp. ANA-3: Shewana3_3704
Help
Entry
Shewana3_3704 CDS
T00428
Name
(GenBank) deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
shn
Shewanella sp. ANA-3
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shn03400
]
Shewana3_3704
Enzymes [BR:
shn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
Shewana3_3704
DNA repair and recombination proteins [BR:
shn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
Shewana3_3704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
ABK49922
UniProt:
A0L1K3
LinkDB
All DBs
Position
1:4445925..4447502
Genome browser
AA seq
525 aa
AA seq
DB search
MQLRQQSQQQLQHFHTVRLILGDQLNAQHTWYQQVDPKVLYLIAELHQENTYVTHHVQKI
CAFFSAMAQFASELGAAGHRVRYLTLDDTQDFADLNALLQHYVAETGAIKFEYQRPDEYR
LLAQLSQLKLANAVVNCVDTEHFLFPFDEIDREFPQGQHRLMEHFYRRMRKRFNILMTDG
KPVGGQWNFDASNRQKLKSQDIKSLPTPLMFGHNVQDILERLTRHGINTMGKVDTHLLWP
TNRAQSLELLQYFCEYCLPAFGRFQDAMTQQHPAQWSLYHSRLSFSLNAKLISPLEVINA
VIEHYHANPFIEIAQVEGFVRQILGWREYVRGIYWANMPQYASINALEATRKLPDYFWHG
KTRMNCLHRALSPSLDYAYAHHIQRLMVIGNFCLLTEIAPDEVDKWYLGVYVDAIEWVEM
PNTRGMALFADGGIVGTKPYAASGSYINKMSDYCGSCHYKIKERSGTLACPLNSLYWRFM
DKHRAQLIHNPRIAMLYRTWDKTDEAARQAILATAEQHLAQLERL
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgcaattacggcagcaatcacagcagcaattacagcacttccacacggttaggctgatt
ttaggcgatcagcttaatgcccagcatacttggtatcagcaagtcgatcctaaggtgctg
tatttaattgcagaattgcatcaagaaaacacctatgtgacacaccatgtgcaaaagatt
tgcgcgtttttcagtgccatggcgcaatttgccagcgagctaggagcggcgggacatcga
gtgcgttacctcaccctcgacgatacccaagactttgccgatctcaatgcattgctccaa
cactatgttgccgaaacgggggcgattaagtttgaatatcaacggcctgacgaatatcga
ctcctcgcgcaattaagccagttgaagttggccaatgccgttgtgaattgcgtcgatacc
gagcactttctattcccctttgatgaaattgatagggaatttccccaagggcaacacagg
ctgatggagcatttttatcgacgaatgcgtaaaaggttcaatatcttaatgacggatggc
aaacccgttggtggacagtggaattttgatgcgagcaataggcaaaagcttaaatcccaa
gatatcaaatctttacctacccccttgatgtttggccacaatgtgcaagacattctcgag
cgccttacgcgccatgggattaacactatgggcaaggtggatacgcatttactctggccg
acaaaccgcgcgcaaagcctcgaattacttcagtatttttgtgaatattgcctgcccgcc
tttggccgctttcaagatgcgatgactcagcaacatccggcgcagtggagcctgtaccat
agtcggctgtcctttagcctaaacgccaaattaatcagtccattagaagtaatcaatgcg
gtgattgagcactatcatgccaacccttttattgagatagctcaggtcgaaggctttgtt
cggcaaattctcggctggcgtgaatatgtgcgcggtatctattgggcaaatatgccgcag
tacgccagcattaatgccctcgaggccacgcgtaagctgcccgactacttttggcatggc
aagactcgaatgaattgcctgcaccgtgctttatctccgtcactcgattatgcctatgcc
catcatattcaacgcttaatggtgattggtaacttttgcctattgaccgaaatcgccccc
gatgaggtggataagtggtacttaggcgtgtatgtggatgcaattgaatgggtcgaaatg
cccaacactcgcggcatggcgctattcgccgatggaggtatcgtcggtactaaaccctat
gccgcgagcggcagttatatcaataaaatgagtgattactgcggcagttgtcattacaag
ataaaagaacgtagcggcaccctcgcctgcccgttaaacagcctatattggcgctttatg
gataaacaccgcgcgcagctcatccacaatccgcgcattgccatgctgtaccgcacttgg
gataaaaccgatgaggcggcaaggcaagccattctggctactgccgaacaacatctggcg
caacttgaacgcctttaa
DBGET
integrated database retrieval system
