Shewanella sp. ANA-3: Shewana3_3814
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Entry
Shewana3_3814 CDS
T00428
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
shn
Shewanella sp. ANA-3
Pathway
shn00061
Fatty acid biosynthesis
shn00071
Fatty acid degradation
shn01100
Metabolic pathways
shn01212
Fatty acid metabolism
shn02024
Quorum sensing
shn04146
Peroxisome
Module
shn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Shewana3_3814
00071 Fatty acid degradation
Shewana3_3814
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Shewana3_3814
09145 Cellular community - prokaryotes
02024 Quorum sensing
Shewana3_3814
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
shn01004
]
Shewana3_3814
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shn04147
]
Shewana3_3814
Enzymes [BR:
shn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Shewana3_3814
Lipid biosynthesis proteins [BR:
shn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Shewana3_3814
Exosome [BR:
shn04147
]
Exosomal proteins
Exosomal proteins of breast milk
Shewana3_3814
Exosomal proteins of breast cancer cells
Shewana3_3814
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABK50032
UniProt:
A0L1W3
LinkDB
All DBs
Position
4580334..4581998
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AA seq
554 aa
AA seq
DB search
MDNAIKTPVEMLAHWANTRGDEIYLRQPIKGQYLDFTWNEVQEKVQQLAGALRHLGLEPG
DKIAVLSKNCAEWFITDLALMHGGYISVPIYPTANTDTIRYVLQHSGAKAIFLGKLDHWA
DQEAGVGGELLRLAMPYETMPAQYQWEQLLKMGNPLIEAPLPELDQTMTLIYTSGSTGQP
KGAIQTFASYGWTCQAVVRDLRTNGNDRLLSYLPLAHITERVAIEGSSFYSGSTVAFVES
LDSFVADVQRAKPTVFFSVPRLWSLFQKNIIDKIGVGKLNLLLKIPLISSLVKHKIHKGL
GLNHCRLLGSGSAPIPPSLIHWYHSIGLDICEAWGMTENCAYSIINYPFDVRKIGTVGKP
VQDCQIRQGEDGELLLKSPGLMTAYYLQPEATAAAFDPDGFFHTGDLCAIDADGCVTITG
RVKDNFKTAKGKYVAPVPIERKLAQDPHVELICVIGSGLPHPVALVQLSEGATLQAREEV
RTSLKATLDSVNPHLESHEHVDAIVVVNEPWTIENDVLTPTLKIKRHVLEKAFSERVDGI
RGAQVRWEDELSAK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggataatgcgattaagacgccagttgaaatgttggcgcactgggcgaatacacgtggg
gatgagatctatttgcgccagcccatcaagggtcaataccttgatttcacgtggaatgaa
gtgcaagaaaaagtgcagcaactcgcgggtgcactgcgccatttaggcttagagccgggc
gataagattgccgtgctctctaaaaactgcgccgaatggtttattaccgacctcgccttg
atgcacggcggctatatcagcgttcccatctaccccaccgccaatacagatactatccgc
tatgtgttgcaacatagtggtgccaaagcgattttcctcggcaagctcgaccactgggcc
gatcaagaagccggcgtcggcggtgaattactccgccttgccatgccctatgagaccatg
ccggctcaatatcagtgggagcaactgctgaagatgggcaaccctctgattgaagcgcca
ttacctgagctcgatcagaccatgacgctgatttacacctcgggctcaacgggccaacct
aagggcgcgattcagacgtttgccagctatggctggacttgccaagcggtggtgcgcgat
ctgcgtaccaatggcaacgacagattattgtcctacttaccgttagcgcatattaccgag
cgtgtggcgatcgaaggctcatctttttattctggcagcacagtcgccttcgtcgaaagc
ttagactccttcgttgccgatgtgcagcgggctaaacctacggtgtttttctcggttccg
cgactgtggagcctgttccagaagaacattatcgacaagattggtgttggcaaactcaat
ctattgctaaaaatcccactaattagcagcctagtaaaacacaagatccacaaaggatta
ggactcaaccattgccgcttactcggctctggctcggcgcctattccgccctctcttatt
cactggtaccacagcattggcttggatatctgcgaagcctggggtatgacggaaaactgt
gcttactccatcatcaactatcccttcgatgtgcgcaaaatcggcactgtgggtaaaccc
gtgcaggattgccaaatccgccagggtgaggacggcgaactgctactgaagagtcccggc
ctgatgacggcctattatctgcaacccgaagcaacagcagcggccttcgatcccgatggt
tttttccatactggcgacctctgcgctatcgatgccgatggttgtgtgactatcactggc
cgcgtgaaggacaactttaaaaccgctaagggtaaatacgtcgctccagtgccaattgaa
cgtaagctcgcgcaggatccccatgtggagctgatttgcgttattggttctggtctgccg
catcccgtcgcattagtgcaactttccgagggcgcgaccttacaagcccgcgaggaagtt
cgcacatctttaaaagcgaccctcgatagcgtgaacccacatttagagtcccatgagcat
gtggatgcgattgtggtcgtgaacgagccttggaccatcgaaaacgatgtgctaactccg
acactgaagatcaaacgtcatgtgctcgagaaggcatttagcgagcgtgtcgacggtatt
cgcggtgcgcaagtacgctgggaagatgagttatctgcaaaataa
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