Shewanella sp. ANA-3: Shewana3_3916
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Entry
Shewana3_3916 CDS
T00428
Name
(GenBank) formate dehydrogenase alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
shn
Shewanella sp. ANA-3
Pathway
shn00630
Glyoxylate and dicarboxylate metabolism
shn00680
Methane metabolism
shn01100
Metabolic pathways
shn01120
Microbial metabolism in diverse environments
shn01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Shewana3_3916
09102 Energy metabolism
00680 Methane metabolism
Shewana3_3916
Enzymes [BR:
shn01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
Shewana3_3916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
TAT_signal
PA-IL
Motif
Other DBs
NCBI-ProteinID:
ABK50134
LinkDB
All DBs
Position
1:4703971..4706823
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AA seq
950 aa
AA seq
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MRLTRKTDQVVEPKVPALGLNRRQFLKSAGLATGGIAAASMLGTGMMRKAQAQEHIPHNA
PTEVKRTICSHCAVGCGIYAEVQNGVWTGQEPAFDHPFNQGGHCAKGAALREHGHGEKRL
KYPMKLEGGKWKKISWEQAINEVGDKMTAIRQESGPDSIYFMGSAKFSNEQAYLYRKLAA
LWGTNNVDHSARICHSTTVAGVANTWGYGAQTNSLNDIRNSKCIMFVGSNPSEAHPVAMQ
HILVAKERGAKIIVVDPRFTRTAAKSDEYVHIRPGTDIPFIYGLLWHIFENGWEDKEFIN
QRVYGMERIRDEVKKYTPEEVENVAGVPKAQMYRIAKMLAETKPGTIVWCMGGTQHHVGN
ANTRSYCILQLALGNMGVSGGGTNIFRGHDNVQGATDFGLLFDNLPGYYGLTSGAWAHWS
GVWDLDPKWVAGRFDQGEYLGQTPQTSTGIPCSRWHDGVLEDKTKIAQKDNIRLAFFWGQ
SVNTETRGREVREALNKLDTVVVVDPIPTMAGVMHQRKDGVYLLPAATQFETYGSVSATN
RSIQWRSKVIEPLFESLPDHVIMYKLAKKLGIEKEFCKHIQVNGEEPLIEDVTREFNKGM
WTVGYTGQSPERLKMHQENWGTFDVNSLTAPGGPAKGEVYGLPWPCWGTPEMKHPGTQIL
YDQSKEVKDGGGTFRARYGVEHNGVSILADGSFSKGSEIQDGYPEFTADMLKQLGWWDDL
TEDEKKLAEGKNWKTDLSGGIQRVAIKHGCIPFGNAKARCIVWTFPDDIPLHREPLYTPR
RDLVAKYPTYEDRMVARLPTLYKSIQDKDFTQGFPLTLTSGRLVEYEGGGEESRSNPWLA
ELQQEMFIEMNPADAADRGIRDGDNVFVHSPEGAKITVKAMVTPRVVPGECFMPYHFAGI
FEGENLAKNYPEGTVPYVQGESANTILTYGYDVVTQMQETKSSLCQVSKA
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacccgcaaaacagaccaagtcgtcgagccaaaagtgcccgccctcggtctt
aatcgtcgccaattcttaaaatctgcaggtcttgccactggtggtatcgccgccgcgtct
atgcttggcacaggtatgatgcgtaaagcacaagcgcaggaacatatcccccataatgca
ccaactgaagtcaaacgtaccatttgctctcactgcgcagtgggttgtggtatctatgct
gaagtgcaaaacggtgtgtggacaggtcaagaacccgcgttcgatcatccatttaaccaa
ggcggccactgcgcgaaaggggctgcactgcgtgaacacggccacggtgaaaaacgcctg
aaatacccaatgaagttagaaggcggtaagtggaagaagatctcttgggaacaagcgatc
aatgaagtaggcgataaaatgacggcgattcgtcaagaatcgggtccagactctatctac
tttatgggtagtgctaagttctctaacgaacaggcttatttatatcgcaaactcgcggca
ctgtggggcacaaacaacgtcgaccactcagcccgtatttgtcactctaccacggtagcc
ggtgttgctaacacttggggctacggtgcgcaaaccaactcgttaaacgatatccgcaac
tctaagtgcatcatgttcgtgggttcaaacccaagtgaagcacaccctgtcgccatgcaa
cacattctggtggcaaaagagcgcggcgctaagattatcgttgttgacccacgtttcacc
cgtactgcagctaagtctgacgagtacgtgcatatccgcccaggtaccgatatccccttc
atctatggtctgttatggcacatttttgaaaacggctgggaagataaagagttcatcaat
caacgtgtttacggcatggaacgtattcgcgatgaagtgaaaaaatatacccccgaagaa
gtcgaaaacgttgcaggcgtgcctaaggcgcaaatgtaccgtatcgctaaaatgttagcc
gagaccaaaccaggcactatcgtatggtgtatgggcggtactcagcaccacgtcggtaat
gccaacacccgttcatactgtattttacagttagcgctgggcaacatgggcgtatctggc
ggcggtaccaacattttccgtggtcacgataacgtgcaaggtgcaacagactttggtctg
ttattcgacaacttacccggttactacggcttaacatcaggcgcttgggctcactggtct
ggcgtttgggacttagatccaaaatgggttgcaggccgtttcgaccaaggtgaatactta
ggtcaaacgccacaaacctcaacgggtatcccctgctctcgctggcacgacggtgtgtta
gaagataaaaccaagatcgcgcagaaggacaatatccgtctggcgttcttctggggtcaa
tcagttaacaccgaaacccgtggccgtgaagtgcgtgaagcgctgaacaagttagatact
gtggtcgttgtcgacccaatcccaaccatggcaggtgtgatgcaccagcgtaaagatggg
gtatatctgctcccagcggcgacccaatttgaaacctacggctcagtgtctgccactaac
cgttcgattcaatggcgctctaaagtcatcgagccactgtttgagtctctgcctgaccac
gtgatcatgtacaaactggcgaaaaagctgggtatcgaaaaagaattctgtaagcacatc
caagtgaatggcgaagagccattgattgaagatgtgactcgcgagttcaacaaaggtatg
tggaccgtcggttacacaggtcaaagcccagaacgtttgaaaatgcaccaagaaaactgg
ggcaccttcgatgtaaacagcctgaccgcaccgggcggcccagctaaaggtgaagtttac
ggcttaccttggccatgttggggtacgccagaaatgaaacaccctggtacccaaattctt
tacgatcaatctaaagaagtgaaagacggcggcggtactttccgtgcccgttacggtgtt
gaacacaatggcgttagcattcttgccgacggttcattctctaaaggcagtgaaattcaa
gatggttatcctgagtttaccgccgacatgctcaagcaattgggttggtgggatgactta
accgaagacgagaagaaactggccgaaggcaaaaactggaagacagacctgtctggcggt
atccaacgtgttgctatcaagcacggctgtattcctttcggtaacgcgaaagcacgttgt
atcgtgtggactttcccagatgatatcccactgcaccgcgagccactctacactcctcgt
cgtgacttagtcgctaaatacccaacctacgaagaccgtatggttgcgcgtctaccgact
ctgtataagtcaattcaggataaggactttacccaaggcttcccactgacactgacctct
ggtcgtttagtggaatacgaaggtggtggtgaagaatctcgttctaacccttggttggcc
gagctacaacaagaaatgtttatcgaaatgaacccggcagacgctgctgaccgtggtatc
cgtgacggtgacaatgtctttgttcatagtcctgaaggcgccaagatcacagtgaaggca
atggtgacaccacgggttgttccgggtgaatgttttatgccataccacttcgccggtatc
ttcgaaggtgaaaacctcgcgaagaattacccagaaggtacagtaccttatgtacaaggt
gaatcggcaaacaccattttaacttacggctatgacgttgtgactcagatgcaagaaact
aagtccagcctttgccaagttagcaaagcctaa
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