Shewanella sp. ANA-3: Shewana3_4339
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Entry
Shewana3_4339 CDS
T00428
Name
(GenBank) Integrase, catalytic region
KO
K07482
transposase, IS30 family
Organism
shn
Shewanella sp. ANA-3
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
Shewana3_4339
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Gene cluster
GFIT
Motif
Pfam:
HTH_38
rve
HTH_23
HTH_29
Sigma70_r4_2
HTH_28
HTH_31
Xre-like-HTH
GerE
HTH_Crp_2
Terminase_5
HTH_3
Cro
MarR_2
rve_3
HTH_24
HTH_50
Motif
Other DBs
NCBI-ProteinID:
ABK50553
UniProt:
A0L3C1
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Position
p1:226703..227731
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AA seq
342 aa
AA seq
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MSYHELSIPERATLQLGLAQGFSQRRIARMLGRSPSTISRELRRNRAPGTRYQACAAQQQ
MQVRRQVCRPQCKLLPGSERFELVVHMLREGLSPEQIAGKLRSMNIPSLREAYVCRETIY
NAIYALPVGGLRKELIICLRQGKTSRRPRSGGVDRRGQIPEMLSIHVRPPEVEDRLMPGH
WEGDLIKGKANASAVGTLVERTSGYLMLIKMADATATSALEGFSAALNGMPLAVRKSMTY
DQGREMARHAEITQRTGVAIYFCDPHSPWQRGSNENINGLIRQYLPKGTDLSVHSQEALD
AIALQLNMRPRKRFDFKCPIEVMGEVMQEAVVMRHDAPASIQ
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcacgaactcagtatccccgaacgtgcgacccttcaactcggccttgcccaa
ggtttcagccagcggcgaattgcccggatgctcggccgctccccctcgaccatcagccgg
gagctgcgccgcaaccgggcccctggcacccgctaccaggcctgtgctgcccagcagcag
atgcaggtccgccgccaggtctgcaggcctcagtgcaagctgctgccgggcagtgagcgc
ttcgagctggtcgtccatatgctgcgtgagggtttgtctcccgagcagattgccggcaag
ctgcgcagcatgaacatacccagcctcagagaggcctacgtctgccgcgagacgatctat
aacgcgatctacgccctgccggtcggtggcctgcgcaaggagctgatcatctgcctgcgc
cagggcaagacgagtcgcaggccgcgctctggcggcgtcgatcggcgcggccagatccct
gaaatgctcagcatccacgtgcgcccgccggaggtcgaagaccggctgatgccaggccat
tgggagggcgacctgatcaagggcaaggccaatgcctcggcggtgggcaccttggtggag
cgtaccagcggctacctgatgctgatcaagatggccgacgcgacggcgacctcggcgctg
gagggcttcagtgcggcgctcaatggcatgccgctggcggtgcgcaagagcatgacctac
gaccagggccgggagatggcgcggcacgccgagatcacccagcggaccggggtggcgatc
tacttctgcgacccgcacagcccctggcaacgcggcagcaatgagaacatcaatggactg
atccgccagtacctgcccaagggcacggacttgtcggtgcatagtcaggaagccctggac
gccatcgctttgcaactgaatatgcgaccgcgcaaacgcttcgacttcaaatgcccgatc
gaggtgatgggcgaagtgatgcaagaagccgtggtgatgcggcatgatgctcccgcttca
attcaataa
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