Shewanella alkalitolerans: K0J45_00095
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Entry
K0J45_00095 CDS
T09228
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
shns
Shewanella alkalitolerans
Pathway
shns00071
Fatty acid degradation
shns00280
Valine, leucine and isoleucine degradation
shns00310
Lysine degradation
shns00362
Benzoate degradation
shns00380
Tryptophan metabolism
shns00410
beta-Alanine metabolism
shns00640
Propanoate metabolism
shns00650
Butanoate metabolism
shns00907
Pinene, camphor and geraniol degradation
shns00930
Caprolactam degradation
shns01100
Metabolic pathways
shns01110
Biosynthesis of secondary metabolites
shns01120
Microbial metabolism in diverse environments
shns01200
Carbon metabolism
shns01212
Fatty acid metabolism
Module
shns_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
shns00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
K0J45_00095 (fadB)
00650 Butanoate metabolism
K0J45_00095 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
K0J45_00095 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
K0J45_00095 (fadB)
00310 Lysine degradation
K0J45_00095 (fadB)
00380 Tryptophan metabolism
K0J45_00095 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
K0J45_00095 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
K0J45_00095 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
K0J45_00095 (fadB)
00930 Caprolactam degradation
K0J45_00095 (fadB)
Enzymes [BR:
shns01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
K0J45_00095 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
K0J45_00095 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
K0J45_00095 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
K0J45_00095 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
QYJ97704
LinkDB
All DBs
Position
complement(20955..23105)
Genome browser
AA seq
716 aa
AA seq
DB search
MIYQSPTIQVELLEDNIARLCFNAEGSVNKFDRETLNSLNDALDALAQTQGVKGLMLTSG
KDAFIVGADITEFLGLFAQDDSVLQGWLEDANKVFNKLEDLPFPTISAIKGFALGGGCET
ILATDLRIADTSARIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGKDQRPEAALK
VGAIDAVVAPELLETAARQMLQDAISEKIDWQARRQRKLSPLTLPKLEAMMSFATAKGMV
FKVAGKHYPAPMAVVEVIEKAALSERAEALQVEHQAFIKLAKTDVAKALIGIFLNDQLVK
GKAKKAAKQAQAVNSAAVLGAGIMGGGIAYQSASKGTPIVMKDINQAALDLGLNEAAKLL
TAQINRGRSTPAKMAGILNNITATLDYNALKQADVVVEAVVEHPKVKATVLAEVEQVVGE
DAIITSNTSTISINLLAKSLQKPERFCGMHFFNPVHKMPLVEVIRGEHSSEETVASVVAY
AAKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLEDGADFAAIDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMAKEGKDAIDVMFEAERFGQKNGKGFYQYSVDRRGKP
KKEVDPLSYELLGNAFGEQKEFSSDEIIARTMIPMIIETVRCLEEGIIATPAEADMGLVY
GLGFPPFRGGVFRYLDTLGVANFVALADQYAHLGGLYQVTDKMRELAATNGSYYLA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagtcctacgattcaagtggaattacttgaagacaatatcgctcggctc
tgttttaacgccgagggctcagtcaataagtttgatcgagaaaccctcaactcccttaac
gacgcactcgatgccctagcacaaacccaaggggttaagggtctgatgctcacctcgggc
aaagatgcctttatcgtaggcgccgacatcacagaattcctgggactttttgcacaagac
gacagcgtgctacagggctggctggaagacgccaacaaggtgttcaacaagctcgaagat
ctgcccttcccaaccatctcagccatcaagggcttcgccctgggcggcggctgcgaaact
atcctagccacagacttacgtatcgccgacacctcggcgcgtatcggcctgccagagact
aagcttggtatcattcctggttttggcggtactgtgcgtctgcctcgcgtgataggtgcc
gacaacgcacttgagtggatcaccacaggtaaagatcaacgcccggaagccgccctcaag
gttggcgccatcgacgccgtagttgccccagagctgctggaaacggcggcgcgccagatg
ctgcaagatgccatcagcgagaagattgactggcaagcccgtcgtcagcgcaagctgtcg
ccgctgaccctgcctaagctggaagccatgatgtcatttgccaccgccaagggcatggtg
ttcaaggttgccggtaaacactatcctgcgcctatggctgttgtcgaagtgatcgagaag
gccgccttgagcgagcgcgccgaggcactacaggtagaacatcaggccttcatcaagcta
gccaagacagacgtggccaaggcacttatcggtatcttccttaacgaccagctggttaaa
ggcaaggccaagaaggctgccaaacaggcgcaagcggttaactccgccgccgtgctgggc
gcaggcatcatgggtggcggtatcgcataccagagcgccagcaagggcacgcctattgtg
atgaaagatatcaatcaggcggcactggatcttggcctcaacgaggcagccaagctgctc
acggcgcagatcaatcgtggtcgctcgacaccggctaagatggcgggcatactcaacaac
atcacggcaaccctggactacaacgcgctcaagcaagccgatgtcgtggtcgaagcagtg
gtggagcaccctaaggtgaaggcgaccgtattggcggaagtcgagcaggttgtgggcgaa
gatgccatcatcacctctaacacctccaccatctcaatcaatctgctggccaagagcctg
cagaaaccagagcgcttctgtggcatgcacttcttcaacccggtacacaagatgccactg
gttgaggtcattcgcggcgagcatagctcagaagagacagttgcctccgtcgtggcttac
gccgccaagatgggcaagacgcctatcgtggtcaacgactgcccaggcttcttcgttaac
cgtgtactcttcccctacttcgccggcttcagcggcctgctagaagatggcgccgacttt
gctgccatcgacaaggtgatggagaagcagttcggttggcctatgggccccgcctaccta
ctagacgtcgttggtctggacacgggtcatcacgcccaggccgttatggccgaaggcttc
cctgacagaatggctaaagaaggcaaagacgccatcgacgtcatgttcgaagccgagcgc
ttcggtcagaagaatggcaaaggcttctaccaatattcggtagatcgtcgtggcaagccg
aagaaagaggtcgacccgctcagctatgaactactgggcaacgccttcggcgagcagaag
gagttcagcagcgacgagatcatcgcccgcaccatgatccctatgatcatcgagacggtt
cgttgtctggaagaaggcatcatagccacgccggccgaagccgatatgggactcgtttat
ggactcggtttccctccattcagaggaggtgtgttccgctacctggacaccttaggtgtc
gctaacttcgtcgcccttgccgatcagtacgcccacctgggtggcctgtatcaggtaacc
gacaagatgcgtgaactggctgccaccaacggcagttactacctagcctaa
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