Shewanella alkalitolerans: K0J45_01665
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Entry
K0J45_01665 CDS
T09228
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
shns
Shewanella alkalitolerans
Pathway
shns00300
Lysine biosynthesis
shns00470
D-Amino acid metabolism
shns01100
Metabolic pathways
shns01110
Biosynthesis of secondary metabolites
shns01120
Microbial metabolism in diverse environments
shns01230
Biosynthesis of amino acids
Module
shns_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
shns00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
K0J45_01665 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
K0J45_01665 (lysA)
Enzymes [BR:
shns01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
K0J45_01665 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
QYJ97984
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Position
369800..371044
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AA seq
414 aa
AA seq
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MDHFLYQQDELYAEQCTVASLAETYGTPLYVYSRATLERHWHAFDNAVADHPHMICYAVK
ANSNLAVLNVLARLGSGFDIVSGGELARVLEAGGEASKVVFSGVGKTVAEMEMALEAGIY
CFNVESAAELEQLNLVALRLGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAMEEAEA
IFLRANELPGLAVKGADCHIGSQLTELQPFLDAMDRMLALIDRLAEQGVKIAHLDVGGGL
GVTYDGEQPPEPSAYASALLGKLAGRDLKLIFEPGRAIAANAGIFVTQVLYLKENAEKNF
ALVDGAMNDLIRPSLYSAWQKIIPVVPRPGETRQYDVVGPVCETGDFLGKDRALNIEAKD
LLAVRSSGAYGFTMASNYNSRPRAAEVMVDGERHYLVREREKVAQLWQGEQLLP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
gtggatcactttctctatcaacaagatgaactctatgccgagcaatgtaccgttgcctcg
cttgcagaaacctatggcacgccactctatgtttattcgcgcgcgactctagagcgccac
tggcatgccttcgacaatgcggtcgccgaccatccccatatgatctgctacgcggtgaag
gccaactcgaatctggcggtgttgaatgtgttagcgcgtctgggcagtggcttcgatatc
gtctccggcggcgagttggcaagagtattagaagccggtggtgaggcgagtaaggtggtc
ttctctggcgtcggcaagacagttgccgagatggagatggccctggaggcggggatctac
tgcttcaatgtcgagtcggccgccgagctcgagcagcttaacctggtcgccctgaggctg
ggcaaagtcgcgccagtatcactgagggtgaaccctgatgtggacgccggcacacaccct
tatatctcaaccggcttgaaagagaacaagtttggtatcgccatggaagaggccgaggcg
atcttcctgcgggcaaatgaattgccgggcctggcggtgaagggtgccgattgtcatatc
ggttctcagctcaccgagttacagcctttcctcgatgccatggatcgcatgttagccctc
atcgaccgtctggccgagcagggggtgaagattgctcatctggatgtgggcggcggtctg
ggcgtgacctatgatggcgagcagccgcctgagccgagtgcctacgccagtgccctgctt
ggtaaactcgcgggacgcgacctcaagctcatcttcgagccgggacgtgccattgccgcc
aatgccggtatcttcgtgactcaggtgctctacctcaaagagaacgccgagaagaatttc
gccctggtcgacggcgccatgaacgacctgattcgtccctcgctgtatagcgcctggcag
aagatcatccctgtggttccacgcccaggcgagacccgccaatatgacgtggtgggccca
gtgtgtgagacgggtgacttcttaggcaaagacagggcgctcaacatcgaggccaaggat
ctgttggcggtgcgctcgtcgggcgcctatggctttaccatggcatcaaattataactct
cgcccccgcgccgccgaggtgatggtggatggcgaacgtcattatttggtgagagagaga
gaaaaagtcgcgcaattatggcaaggtgaacaactcctcccttaa
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