Shewanella alkalitolerans: K0J45_02420
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Entry
K0J45_02420 CDS
T09228
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
shns
Shewanella alkalitolerans
Pathway
shns03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shns00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K0J45_02420 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shns03019
]
K0J45_02420 (groL)
03110 Chaperones and folding catalysts [BR:
shns03110
]
K0J45_02420 (groL)
03029 Mitochondrial biogenesis [BR:
shns03029
]
K0J45_02420 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shns04147
]
K0J45_02420 (groL)
Enzymes [BR:
shns01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
K0J45_02420 (groL)
Messenger RNA biogenesis [BR:
shns03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
K0J45_02420 (groL)
Chaperones and folding catalysts [BR:
shns03110
]
Heat shock proteins
HSP60 / Chaperonin
K0J45_02420 (groL)
Mitochondrial biogenesis [BR:
shns03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
K0J45_02420 (groL)
Exosome [BR:
shns04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
K0J45_02420 (groL)
Exosomal proteins of other body fluids (saliva and urine)
K0J45_02420 (groL)
Exosomal proteins of breast cancer cells
K0J45_02420 (groL)
Exosomal proteins of colorectal cancer cells
K0J45_02420 (groL)
Exosomal proteins of bladder cancer cells
K0J45_02420 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QYJ98122
LinkDB
All DBs
Position
529789..531438
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKEVLFGNDARVKMLAGVNVLANAVKVTLGPKGRNVVLDKSFGAPLITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVTEGLKAVAAGMNPMDLKRGI
DKAVVAAVAELKTLSQECSDTKAIAQVGTISANSDESIGEIIATAMEKVGKEGVITVEEG
QALENELDVVEGMQFDRGYLSPYFINKPETGSVELENPYILLVDKKISNIRELLPILEGL
AKTGKPLMIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
IAEEIGLELEKATLEDLGTAKRVVITKDDTTIIDGTGEQEQISARVAQIKIQAEESTSDY
DREKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RVASKIGELDVANEDQKHGVTIALRAMEAPLRQIATNAGEEASVVANNVKNGSGNYGYNA
GSDVYGDMLEMGILDPTKVTRSALQFASSIAGLMITTEAMVGDVPQEAGAGDMGGMGGMG
GMGGMGGMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagttttatttggcaatgacgctcgcgtaaaaatgcttgcgggcgta
aacgtactggctaacgcagttaaagttaccctgggccctaaaggtcgtaacgtagttcta
gacaagagcttcggcgcgccgctgatcaccaaagacggtgtatcggtcgctaaagagatc
gaactggaagacaagttcgaaaacatgggcgcccagatggtgaaagaagttgcttctaaa
gccaacgacgccgccggtgacggtaccactactgcaaccgtactggcacaagccatagtt
accgaaggcctgaaagccgttgccgctggcatgaacccaatggatcttaagcgcggtatc
gacaaggcggttgtggctgccgttgccgagctgaaaaccctgtctcaagagtgtagcgac
actaaggctatcgctcaggtaggtaccatctctgctaactctgacgagtcaatcggcgaa
atcatcgcaactgcgatggaaaaagtcggtaaagaaggcgtgatcacagttgaagaaggt
caggccctagagaacgagctggacgtggttgaaggtatgcagttcgaccgtggttacctg
tctccatacttcatcaacaagccagaaactggcagcgttgaacttgaaaacccatacatc
ctattggttgacaagaagatctctaacatccgtgagctactgcctatccttgaaggtctg
gcgaaaactggtaagccactgatgatcatcgcagaagacgttgaaggcgaagccctggcg
actctggttgtgaacaacatgcgcggcatcgttaaagtagctgcggttaaggcaccaggt
ttcggtgaccgtcgtaaggcgatgctacaagatatcgctatcctgactggcggtactgtg
attgccgaagagatcggtctagagcttgaaaaagcgactctggaagacctaggtaccgct
aagcgcgtggttatcaccaaagatgacactaccatcatcgacggtaccggcgagcaagag
cagatctctgcccgtgttgcccagatcaagatccaggcagaagagtctacttcagactac
gaccgtgaaaaactacaagagcgtatggctaagctagccggcggtgttgcagtgatcaaa
gtcggtgccgctaccgaagttgaaatgaaagagaagaaggctcgcgtagaagacgcgctg
cacgcgactcgcgccgctgttgaagaaggtgtggttgccggtggtggtgttgccctgatc
cgtgttgcctctaagattggcgagctggacgtggctaacgaagaccagaagcacggtgtg
actatcgcactgcgcgccatggaagcgcctctacgtcaaatcgcgaccaacgcaggtgaa
gaagcctcagttgtagcgaacaatgttaagaacggctctggtaactatggttacaacgcc
ggtagcgatgtgtacggtgacatgctagagatgggtattcttgacccaactaaggtgact
cgtagcgcgctacagttcgcttcatctatcgcaggtctgatgatcactaccgaagctatg
gttggtgatgtaccgcaagaagctggtgctggcgatatgggcggcatgggcggaatgggt
ggtatgggcggtatgggcggcatgatgtaa
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