Shewanella alkalitolerans: K0J45_03995
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Entry
K0J45_03995 CDS
T09228
Symbol
asnC
Name
(GenBank) transcriptional regulator AsnC
KO
K03718
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Organism
shns
Shewanella alkalitolerans
Brite
KEGG Orthology (KO) [BR:
shns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shns03000
]
K0J45_03995 (asnC)
Transcription factors [BR:
shns03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
K0J45_03995 (asnC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
NirdL-like_HTH
HTH_11
MarR_2
HTH_20
HTH_IclR
HTH_5
HTH_34
HTH_Tnp_4
MarR
B-block_TFIIIC
Clp_N
Mga
Sigma70_r4
TrmB
HTH_Crp_2
TMP_3
DIP2311-like_C
Motif
Other DBs
NCBI-ProteinID:
QYJ98411
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Position
complement(895831..896292)
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AA seq
153 aa
AA seq
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MDSSFQRDQLDNQILSALMEEARTPFAELAKRFGVSAGTIHVRVEKMKQAGIITGAQITV
NPKALGYDVCCFIGINLKSAGDYPAAIAKLNALEEVTEAYYTTGNYSIFVKVMCQSIDGL
QHVLINRIQSIDEIQSTETLISLQNPISRAVKP
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atggatagttcatttcagcgagaccagctcgacaaccagatcctctcggcgcttatggaa
gaggcgcgcacccccttcgccgaattggccaaacgtttcggcgtcagcgccggcaccata
catgtgcgagtagagaagatgaaacaggcgggcatcatcacgggcgcccagatcacggta
aaccctaaggccctcggctatgacgtctgctgttttatcggcatcaacctcaagagcgcc
ggcgactatcccgccgccatcgccaaactcaacgccttagaagaggtcaccgaggcctac
tacaccacgggcaactacagcatcttcgtcaaggtgatgtgccagtcgatcgatggcctg
cagcatgtgctgatcaaccgcatccaatccatcgatgagatccaatccaccgagacactc
atcagtttacaaaatcctatcagccgcgccgtgaagccatga
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