Shewanella alkalitolerans: K0J45_04125
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Entry
K0J45_04125 CDS
T09228
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
shns
Shewanella alkalitolerans
Pathway
shns00630
Glyoxylate and dicarboxylate metabolism
shns00680
Methane metabolism
shns01100
Metabolic pathways
shns01120
Microbial metabolism in diverse environments
shns01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
shns00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
K0J45_04125 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
K0J45_04125 (fdhF)
Enzymes [BR:
shns01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
K0J45_04125 (fdhF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Pyr_redox_2
Molydop_binding
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Pyr_redox_3
Fer2_4
Fer4_7
NAD_binding_8
Fer4
DAO
Fer4_8
FAD_oxidored
Fer4_9
NAD_binding_7
Fer4_6
Fer4_21
HI0933_like
Fer4_10
Fer4_17
Fer4_18
FAD_binding_2
GIDA
Amino_oxidase
FAD_binding_3
Thi4
AlaDh_PNT_C
F420_oxidored
Lys_Orn_oxgnase
2-Hacid_dh_C
Fer4_15
Fer4_2
Fer4_16
Emfourin
Fer4_22
CxC7
Motif
Other DBs
NCBI-ProteinID:
QYJ98436
LinkDB
All DBs
Position
complement(925947..930179)
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AA seq
1410 aa
AA seq
DB search
MIELTFDGQVVKANRGEDLLTCAKAAGIAIPNLCHLGKQLDDKLAGKQDCNLCYVEVRDD
QGDLHTVKACKTQVEAPLEVITHSAALSKRRQAALKHLLNDHFADCEAPCQQACPAGVDV
QSYLLHIAQGNHKEAVKVIKQTLPLPLSIGRVCPAFCESACRRGELDEPLAIRQLKRHAA
DLDLDSEDTYVPPKAPATGKRVAIIGSGPAGISAGYYLSNSGHEVTIFESMPKAGGWLRY
GIPEYRLPKQILDREIDLLCQNGLVIQTDTRLGRDIHLKELVSQFDAVCLAIGAQKAVPM
NYPGVDLEGCYLGVDYLKDHCTDNNYLTGQKVAVIGGGNTAIDCARTALRKGAEVTLVYR
RTRDEMPAEIYEIEEAEHEGVRFYFLTNPIENHGDANGHINAVTFEKMRLGEPDASGRRS
PQATGETFTEAFDTVIPAVSQTPDMTFLEHPESQLSTGEVALTRWNTFSGCEHTMSSGVE
KLFVLGDSRTGPATAVAAVADGRKAANAIEKLLSGELSCELTPAPFNSQKQDEQKPDSRH
FPARLLQAKAKMPELAINKRLDNFDEIELGFNDEEAMLEAARCLECGCQANTECALRDYA
TEYRVDSAALDKQGHRAFTQDASTPFINFDPNRCISCGACVAMCRQQSGHQAISFEPDSY
LALPQEMAATYSRQAPRAGFSATMADSQCVQCGNCVQVCPTGALTDARDKRQGVKHELKQ
TSTVCTYCGVGCRVIIHSDPVTGEIKRVSGDNRSQVNEGMLCVKGRFGFDFINSQQRLTQ
PLLRRDGELVPVSWNEAIDYIGTQLGRIKAEHGGDAIAGLASAKATNEDNYLFQKLFRSV
IGTNNIDHCARLCHASTVTALQESLGSGAMTNDIPSIKSSDLIFILGSDTEAAHPIIASK
IKQAVNQHGARLVVADPKRVSIADSAELYLRHRPGSDVMLLNAIMQEIIKQGWQDSDYIS
RRVEGFDALRAEVMKDDYSLSNAAKITGVGEEEIAQLARMIGTAEKTAIYYAMGITQHTS
GHDNVTAIANLQLLCGNIGVEGAGINPLRGQSNVQGACDMGALPNYFTGYQKVTDPEVQA
AFRQAWQQEWLPDQIGLAATEMMHALAHGRLKALYVMGENPVLSDPDQAHVMQGLESAEL
LIVQDIFMTETAQLADVVLPAASFAEKPGHFTNTERRVQRLQAAIDSPGLARRDWQIITD
IAKALGADWRYEDEASIWQELTRVTPQYRGIQWHDTDPSTPQGLLGKQWPCPEPGHEGTR
LMHKERFTRGLGKMTPVGYRLPAELPCEDYPFTLSTGRLLEQFHTGTLTRKTDGLNTLGS
PKVMMSAIDADRLGVNNGDVLTLSTRRGSINIAAFVTRRAQPGVLFLPFHFAEAAANKLT
NNALDPVAKIPEFKICAVRVEKASEAICWS
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgatagaactcaccttcgacggccaagtcgtcaaagccaaccggggcgaagatctgctc
acctgtgccaaggccgcaggcatagcgatccctaatttatgtcatctgggcaagcaactg
gacgacaaactcgcgggcaagcaagactgcaacctctgctatgtcgaggtgcgagacgac
cagggcgacctccacacagtcaaggcctgtaagacacaggtcgaggcgccgctcgaggtg
atcactcactcggccgccctcagcaaacgccgtcaggcggcgctgaaacaccttttgaac
gaccacttcgccgactgcgaagccccctgccaacaggcctgtccggccggcgtagacgtg
cagtcctatctgctgcatatcgcccagggcaaccacaaggaagcggtcaaggtgatcaaa
caaaccctgccgctgccgctctctatcggccgtgtctgcccggcgttttgcgaatcggcc
tgtcgccgcggcgagctggatgagcccctggccattcgtcagctcaagcgtcacgccgcc
gacctggatttggacagtgaagacacctatgtgccgcccaaggcgcccgccaccggcaaa
cgcgtcgccatcataggcagcggcccggcggggatcagcgcgggttactacctctccaac
tcaggtcatgaggtgaccattttcgaatccatgcccaaggcgggcggctggctaagatac
ggtattcccgagtaccgtctgcccaagcagatcctggacagagagatagacctgctgtgt
caaaatggcctggtgatacagacagatactcgtctcggccgagacatccacctcaaggag
ctagtcagccaattcgacgccgtctgtctcgccatcggcgcccagaaggcggtgcccatg
aactatccaggcgtagacctcgaaggttgctatttaggcgtggattaccttaaagatcac
tgcacagacaacaactacctcacaggccagaaggtggcggtgatcggcggcggcaacacc
gccatcgactgcgcccgcaccgcgctacgcaagggtgccgaggtaaccctggtctatcgc
cgcacccgcgatgagatgccggctgagatctatgagatagaggaggccgaacatgagggc
gtgcgcttctatttcctcactaaccccatcgaaaaccatggcgatgccaatggccatatc
aatgccgtcaccttcgagaagatgcgccttggcgaacccgatgcctccggcagacgctca
ccccaggccacgggcgagaccttcaccgaggcgttcgatactgtgatcccggccgtctcc
cagaccccggacatgaccttcctcgagcatccagagagtcagctctccaccggcgaggtg
gccctgacccgctggaacaccttctccggctgtgaacatactatgtcatcaggggtggag
aaactgtttgtgctcggggattcacgcaccggccccgccaccgcggttgccgcggtggcc
gatgggcgcaaggccgccaatgccatcgagaaactgctgagcggcgagctgagctgcgag
ctgacacccgcgcccttcaactcccagaagcaagatgagcagaagcctgacagccgtcac
ttcccggctcgtctgctacaggccaaggccaagatgccggaactggccatcaacaagcgc
ctggataatttcgacgagatagaactcggcttcaacgacgaggaggcgatgctcgaggcc
gcccgctgcctggagtgtggctgtcaggccaacacagagtgtgccctgcgggactacgcc
accgagtaccgtgtcgatagtgccgcgctcgataaacagggccaccgcgcctttacccag
gatgccagtacgccttttatcaacttcgaccccaaccgctgcatcagctgcggtgcctgc
gtcgccatgtgccgccagcagtctggccatcaggcgatcagcttcgagcccgacagctat
ctagccctgccccaggaaatggccgcaacatacagccgtcaggcgcctcgcgccgggttc
agcgccaccatggccgacagccagtgtgtgcagtgcggtaactgtgtccaggtctgcccc
acaggggcgctgaccgatgcaagagacaagcgtcagggcgttaaacatgagctgaaacag
acctccaccgtctgcacatactgcggcgtgggttgccgtgtcatcatccacagcgatccc
gtaactggcgaaatcaaacgcgtctcgggcgacaaccgctcccaggtcaacgaggggatg
ctctgcgtcaagggccgcttcggattcgacttcatcaacagccagcaacgtctgacccag
ccgctgctgcgcagagatggtgagctggtgccggtcagctggaatgaggcgatcgattac
ataggcactcagctgggtcgcatcaaggccgaacatggcggcgacgccatagcaggtctg
gcctccgccaaggcgaccaatgaagataactatctgttccagaagctgtttagaagcgtc
atcggcaccaacaacatagatcactgcgcccgcctgtgtcatgcctcgacggtcaccgcc
ctgcaagaaagccttggcagcggcgccatgaccaatgatattccgtcgataaaatcctcg
gatctcatcttcatcttgggctcggataccgaagccgcccaccctatcatcgcctccaag
atcaaacaggcggtgaaccaacacggtgcccgcctggtggtggccgaccccaaacgggtg
agcatcgccgacagcgccgagctctacctgcgtcaccgccccggcagcgacgtcatgctg
ctcaacgccatcatgcaggagatcatcaagcagggctggcaggacagcgactacatcagt
cgccgtgtcgaaggattcgacgcactgcgcgccgaggtgatgaaggacgactacagcctg
agtaacgccgccaagatcaccggggttggcgaagaggagatagcccagctggcccgcatg
ataggcacggcagagaagaccgccatctactatgccatggggatcacccagcacacctcg
ggacatgacaatgtcaccgccatcgccaacctgcaactcctgtgcggcaacataggcgtc
gagggcgcggggatcaacccgctgcggggccagagcaatgtccagggggcttgcgatatg
ggcgccctgcccaactacttcaccggctaccagaaggtcaccgaccccgaggtgcaagcc
gccttcagacaagcctggcagcaggagtggctaccggatcagataggtctggcggcaacc
gagatgatgcacgccctggcccacggcaggctcaaggccctctatgtgatgggggaaaac
cctgtactgagcgatcccgatcaggcccatgtgatgcaagggctggagtcggccgagctg
ctgatcgtccaggatatcttcatgacggagaccgcccagctggccgacgtggtgttgcca
gccgccagcttcgccgagaagcctggccacttcaccaataccgagcgccgggtgcagcgt
ctgcaggcggccatcgacagcccaggtctggcccgccgcgactggcagatcatcacagat
atcgccaaggcactcggcgccgattggcgctatgaggatgaagcgtccatctggcaggag
ctgacccgcgtcacgccccagtaccgcggcatccaatggcatgacacagaccccagcacg
ccacaaggcctgctgggtaagcagtggccctgtcccgagcccggccatgagggcacccgc
ctgatgcataaagagcgctttacccgcggacttggtaagatgacgcccgtcggctaccgc
ctgccggccgagctgccctgtgaggattatcccttcaccctttccaccgggcgcctgctg
gagcagttccacaccggcaccctaacccgcaagacggacggtctcaataccctgggttca
cccaaggtgatgatgtcggccatcgacgccgaccgcctgggggtaaacaacggcgacgtg
ctgaccctgtcgacgaggcgcggcagcatcaacatcgccgccttcgtcacgcgccgcgcc
cagccgggagtgctcttcctgcccttccactttgccgaagcggcggctaacaagctgacc
aacaatgcgctggatcctgtggccaagatccccgagtttaagatctgcgccgtcagagta
gagaaggccagcgaggcgatctgctggtcttag
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integrated database retrieval system
