Shewanella alkalitolerans: K0J45_05275
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Entry
K0J45_05275 CDS
T09228
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
shns
Shewanella alkalitolerans
Pathway
shns03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shns00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K0J45_05275 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shns03400
]
K0J45_05275 (recO)
DNA repair and recombination proteins [BR:
shns03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
K0J45_05275 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
K0J45_05275 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
QYJ98653
LinkDB
All DBs
Position
1188418..1189113
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AA seq
231 aa
AA seq
DB search
MHRGYVLHTRPYRESSVLVNLLVDGLGRVDAVARLGSGKTSIKSILQPFQPLLFQLSGRS
SLKSLYQVEAASPAVPLSGNDSFAGFYLNELLVRCLSVEHGAEQFFFTYHKTLMAMAAAF
SEAQLRQFELALLKELGVMPSLNLDIEGSPIETDFYYRLLSEEGFSTALGPKPNHFSGEM
LRALEEDRLTEADFKQAKLLMRQLLSPLLGDKPLKSRALFLKGNRPSSYSK
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgcacaggggatatgtactgcacacccgtccctatcgggagtcgagcgtgctggttaat
ctgttggtcgacggcctgggcagggtcgatgccgtcgcgcgcctgggcagtggcaagacc
tcgataaagagcatactgcaaccctttcagcccttgctgtttcagctgtctgggcgaagc
agcctcaagagcctgtatcaggtggaggccgccagcccggctgtgcccctgagcggcaat
gacagtttcgccggcttctatctcaacgagttgttggtgcgctgcttgtcggtcgagcat
ggcgccgagcagttcttctttacctatcataagacactgatggccatggccgccgccttt
agcgaggcgcagctcaggcagtttgagcttgcgctgctcaaggagcttggggtgatgcca
tcgctgaatctggatatcgaaggcagccctatcgagaccgatttctactatcgcctgtta
tccgaagagggctttagcacggcgcttgggcccaagcccaaccattttagcggcgagatg
ctgcgcgccctggaggaagacaggctgacagaggccgattttaaacaggctaaactgctg
atgaggcagctactgtcgcccctgctgggggacaagccgcttaagtcgcgggcgctgttt
ttaaagggcaacaggccatcgagttacagcaagtag
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