Shewanella alkalitolerans: K0J45_05555
Help
Entry
K0J45_05555 CDS
T09228
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
shns
Shewanella alkalitolerans
Brite
KEGG Orthology (KO) [BR:
shns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shns03000
]
K0J45_05555
Transcription factors [BR:
shns03000
]
Prokaryotic type
Helix-turn-helix
LacI family
K0J45_05555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
HTH_26
Crp
TnsD
FlgM
Motif
Other DBs
NCBI-ProteinID:
QYJ98707
LinkDB
All DBs
Position
complement(1249613..1250632)
Genome browser
AA seq
339 aa
AA seq
DB search
MKVTINDVAKYAGVSIKTVSRVTNNEPSVRQATIDKVNQAIAALNYQPNVAARNLAGTKS
YVIAFVYDNPNAYYVIDMQNGILSSCKQRGYELLIHPCDAKSDNICQELVDMVRHARLSG
LVLTPPLSEDPKVLAALDQINANYVRIIAGEEVNPTDGLSILVNDKHGAVSITQHLIDLG
HKNIAFLSGDHQHESTKERLAGFKAALQNNHLSLDESNIINGQYSFESGVEGAKTLLAKA
NRPTAIVACNDEIAAGALFAARLAGVAIPEELSIVGFEDSPFSRQTWPKLTTVHQPNKLI
AQTATELLIENQGNKQSETTHQVFIPEPVLRDSSASPKA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcaccattaatgacgtcgccaaatatgccggcgtctccataaaaacggtttca
cgggtcacaaataacgagccttcggttcgtcaggcgacgattgataaagtgaatcaggcg
attgccgcacttaattaccagcctaatgtcgctgcccgtaatctagccggcacaaaatcc
tatgtgatcgcctttgtctacgacaaccccaatgcctactatgtcattgatatgcaaaat
ggtattttgtcttcctgtaagcaaagaggctatgagctactcatccatccctgcgatgcc
aagtcagataatatctgtcaggagctggtcgatatggtgcgccatgccaggctgtcaggc
ttggtattaaccccgccgctatcggaagaccccaaagtcttggcggccttggatcagatt
aatgccaattatgtacgcattattgcaggggaagaggtgaacccaaccgatggcttatcg
atcctggtcaacgataaacatggcgcggtttccatcacccagcaccttatcgatctcggc
cataaaaatatcgccttcctgagcggtgaccatcaacacgaatccaccaaggaacgtctt
gccggttttaaggccgccttgcaaaacaatcacctatcccttgacgagtccaacatcatc
aatggtcagtattcttttgaatcgggtgtagaaggggctaaaacactgctggcgaaagcc
aatcggccgacggccatagtcgcctgtaacgatgaaattgccgcaggggcactcttcgcg
gctaggttagcaggggtagcaatacccgaggagctctctatcgtgggtttcgaggatagc
cccttctcgagacagacctggcctaaactaaccacagtccatcagccaaataagttgata
gcgcagacggcaaccgagttacttatcgagaatcagggcaataagcagagtgagacgact
catcaggtcttcattcccgagccggtactgagagactcatcggcaagcccaaaggcttag
DBGET
integrated database retrieval system
