Shewanella alkalitolerans: K0J45_05560
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Entry
K0J45_05560 CDS
T09228
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
shns
Shewanella alkalitolerans
Brite
KEGG Orthology (KO) [BR:
shns00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shns02000
]
K0J45_05560
Transporters [BR:
shns02000
]
Other transporters
Pores ion channels [TC:
1
]
K0J45_05560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
QYJ98708
LinkDB
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Position
1251045..1253636
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AA seq
863 aa
AA seq
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MRPSTFKKSVLATNIALLMSGAVSVSALAAEADAEAVNTDNIEKIEVRGLRASMKASINA
KRFSDAVVDAVTAEDIGKFPDGDVGESLGRIPGVTVNRQFGQGQQVSIRGASAQLTRTQL
NGHSVASTGWFDQQAIDRSFNYSLLPPEMISGIEVYKSSQADITEGGIGGTVIVKTRKPL
DLDANTLFLSAKGDYGTVSEATDPAVSGLYSWANEGETFGVLVSAAGSQTDYQRNGIETL
LGWGEIVPTTFQQDRERTAYNIAAQYRPTDNLEFGLTVTSLDLKANNANTSIFLFPTQQG
VSTCNKTNAAGVCTDITHTGEGGFAWAQTWAREAEMSSDTYDLDFKYEGEGFTLEGRVGN
TKADGGTSLTSNYGNSIGQPGDFAGHYDATGEKIIIDIANKSFDAGDFNGQLETAGWALK
KQPNTDEETYAQFDLTFPVDFGAITSIKAGVRYADHDVTQQTDAAIVGDIVAKDASEYYS
GTISSGAGFTLPKPNFDAMIRDAKAAVDGFTRDKSGYGTLNEKNLAAYAMANFEAEGIRG
NFGLRFINTDVSSDYYALSPLGEYADELSTDKSSYSDVLPSINVAFDLADDLILRTSAAQ
VMSRPNYSELFATPTLPGFNDGTPGNEKLVTGSVALDPFKATQADVSLEWYFGGEGLASL
TYFIKDVSSFISTRQELEQSIGIIDPNSGEDSWTVSKYYNANGGRIEGVELQLQDSFENG
LGYSVNYTFADAGSPAENYPDRVGVFSDSSKHTVNLVGYYEMDSFSARLAYNWRSEYMMR
ELPGFYGNRQHQDYGSLDLSMNYSVTDWMDLTFEAVNLTEEDSIQIGVSPVDAPDVIAEF
KDNYPVWSFEGEARYKVGVALRF
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccatctacttttaagaaaagtgtactagctacaaatattgcgctgctgatgagc
ggtgcagtgtctgtttctgctctagcggcagaggccgatgcagaagcagttaatactgat
aatattgaaaaaattgaagtacgtggtctgcgtgcttcgatgaaggcgtcaattaacgcc
aaaagattttctgatgccgttgtcgacgccgttacagccgaagacattggtaaattccct
gatggcgatgtaggtgagtcactgggtcgtattccaggtgttaccgttaaccgccagttt
ggccaaggtcagcaggtgtcgattcgtggtgcctctgctcagctaactcgcacccagtta
aatggtcattcggttgcctcgaccggttggtttgaccaacaggctatcgaccgtagcttt
aactattctctgctgccacccgagatgatcagcggcatcgaagtttataagtcttctcag
gccgacatcacagaaggtggtataggtggtactgtaatcgttaagacccgtaagccgctg
gacttagatgccaataccctattcttaagcgccaagggcgattatggtactgtctctgaa
gcgacagaccctgcggtttctggcttgtatagctgggctaatgagggcgaaaccttcggt
gttctggtctctgctgcgggctctcagaccgactatcagcgtaacggtatcgaaaccttg
ttgggttggggcgaaattgtgccgacaactttccaacaagatcgtgagcgcaccgcttac
aacattgccgcccagtatcgtccaaccgacaacttagagttcggcctaacggttactagc
ctagatctaaaagcaaataacgccaacacctctatcttccttttcccaacacagcaaggc
gtcagcacttgtaataagaccaatgctgcgggtgtttgtactgacattacccatacgggc
gaaggtggatttgcctgggcacagacttgggctcgtgaagccgagatgtcgtcagatacc
tatgacctggacttcaaatatgagggtgaaggtttcaccctcgaaggccgcgtcggtaac
accaaggcagatggtggtactagcctaacctctaactatggtaactctatcggtcagcct
ggtgacttcgccggccactatgatgccactggtgagaagatcattatcgacatcgccaac
aagtctttcgatgcaggcgatttcaacggtcagctagaaactgctggttgggcgctgaag
aagcagcctaacaccgacgaagagacctatgctcagttcgacctgaccttcccggttgat
tttggtgccatcacttcgattaaagccggtgtacgctatgccgaccatgacgtgacgcag
caaactgacgcggcaatcgtgggtgatatagtggctaaggatgcctctgaatactattca
ggtactatctcttctggtgcaggttttaccctgcctaagccgaactttgatgccatgatc
cgtgacgctaaggccgctgtagatggctttacccgcgataagtctggttacggtactctt
aatgagaagaacttggccgcctacgccatggctaacttcgaggcagaagggatccgtggt
aacttcggtcttcgattcatcaatacggatgtgagctctgattactacgcattaagccca
ctgggcgagtatgctgatgagctgagcacagataagtcgagctatagcgatgtactacca
agtattaacgttgcattcgatcttgctgatgacctaattttacgtacttctgctgcgcag
gtgatgtctcgtccaaactattctgagctgtttgccactcctacacttcctggttttaac
gatggtacgccaggaaacgagaaactggtaaccggttctgttgccctggatccatttaag
gcgacccaggccgatgtgagcttagagtggtacttcggtggtgaagggctggcttctttg
acttactttatcaaggatgtttcttcattcatttcgactcgtcaggagcttgagcagtcg
attggtattattgaccctaactctggcgaagatagctggactgttagtaagtactacaat
gctaacggtggtcgtatagaaggggttgagctgcagctgcaagactcgttcgaaaatggt
cttggctactcggttaactacaccttcgccgatgcaggctctccagccgagaactaccca
gacagagtgggcgtattctctgactcttctaagcacacagttaacctagtgggctactat
gagatggatagcttctctgcacgtctggcctacaactggcgtagcgaatatatgatgcgt
gagctaccaggtttctatggtaaccgtcagcaccaagactatggatcgctggatctgagt
atgaactacagcgtgaccgattggatggatctgaccttcgaagccgttaacctcacagag
gaagacagcattcagatcggtgtctcgccagtggatgccccagatgtgatcgccgagttt
aaagataactacccagtgtggagcttcgaaggcgaagcaagatacaaggtgggtgtcgca
ctgcgattctaa
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