Shewanella alkalitolerans: K0J45_05860
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Entry
K0J45_05860 CDS
T09228
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
shns
Shewanella alkalitolerans
Pathway
shns00500
Starch and sucrose metabolism
shns01100
Metabolic pathways
shns01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
shns00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
K0J45_05860 (glgX)
Enzymes [BR:
shns01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
K0J45_05860 (glgX)
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Gamma_PGA_hydro
Motif
Other DBs
NCBI-ProteinID:
QYJ98762
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Position
1315815..1318052
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AA seq
745 aa
AA seq
DB search
MRLTHGKPYPLGACLDSEGVNFALFSAHATAVYLCLFDEEDREVARLRLERQSQQIWHGH
VSGIRAGCRYGYRVDGPYQPLIGHRFNVNKLLLDPYAKRLSGAIKDHKSHYGYQFGHEQE
DLSFCELDNAELMPKCVVVDLKNLRPITPLVNPFDQSDSPLSLRRSVIYELHVKGFSQQN
PEVVSERRGRFAGLGDPASLQHLKSLGVTAVELLPVQQFVTEAFLQQKGLTNYWGYNTIG
YFAPHQAYLSESISESEGDGAIEEFRDMVSALHGAGIEVILDVVYNHSAEGNRLGPTYCF
KGIDNLSYYRLHPSEPRYYINDTGCGNTLNLSHPRVLQLVMDSLRYWVEVMGVDGFRFDL
ASTLGREDHGFDVGSGFFDAISQDPVLSQVRLIAEPWDIGPGGYQLGQFPIGWSEWNDRY
RDTVRRFWRGDAGMLPEFATRFHGSSDLFEHAGRKPAASINFITSHDGFTLMDLVSYRHK
HNQANGEQNRDGHNENYSDNYGHEGQSDELALTALRARQCRNMLTTLFMSQGVPMLLAGD
EVGHSQLGNNNAYCQDNPASWLDWRKDIDSDELLSFTANLIKLRRRFPMLCHRDYIHESA
NQASPGLDWFCRQGEPMTKAHWGEAQTRTLSLVISGELEAQAGCRQALLLMFNADNRSQQ
FTLPSLEGIVQWQCLLSTQDSPQYGESASYQALLQGASLVLQDRSLMIYYAQFTSFAVEP
SAVKEPSAKEEPSAREMPSAKGESR
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgacccacggtaagccttatcccttgggggcctgcttagatagcgagggggtg
aacttcgcgctgttttccgcccacgccactgccgtctacctctgtctgtttgacgaggag
gatagggaggtggccaggctgcgtctcgagcgtcagtctcagcagatctggcatggccat
gtgtctgggatcagggcggggtgtcgctacggctatcgggtcgatggcccctatcagccc
ttgattggccacagatttaatgtcaacaagctgctgctcgacccctatgccaagcgcctg
agtggcgcgattaaagatcataaatcccactacggctatcagtttggtcatgagcaggaa
gacttaagcttctgcgagctggataacgccgaactgatgcccaagtgtgtggtggtggat
ctcaaaaaccttaggcccataacgcccctggtgaaccctttcgatcagagtgacagcccg
ctgtcgctgcgccgcagtgtgatctacgagctgcatgtgaagggttttagccagcaaaat
cccgaggtggtcagtgagcgtcgcggacgtttcgccggcctcggtgaccctgctagcctg
cagcacctgaaaagccttggggtcacagctgtcgagctactgcccgtgcagcagtttgtc
accgaggccttcctgcagcagaaggggctgactaactactggggttacaacaccataggc
tatttcgcgccccatcaggcctacctaagcgagtcaataagcgagtctgagggcgatgga
gcaatagaggagtttcgcgacatggtcagcgccctgcacggcgccggcatagaggtgatc
ctggatgtggtctataaccatagcgccgagggcaatcgtctcgggcctacctactgcttt
aaggggatagataacctcagctactaccgtctccaccccagcgagccgcgctactacatc
aatgacacaggctgtggcaataccctcaacctgtcacaccccagggtgttgcagctggtg
atggattcgctgcgttactgggtcgaggtaatgggggtcgacggcttcaggttcgatctg
gccagcaccttggggcgtgaggatcacggcttcgatgtgggctccggcttcttcgatgcc
atcagccaagatcctgtgcttagccaggtgcgtctcatcgccgagccttgggacataggt
ccaggcggctatcagctggggcagttccccatcggctggagcgagtggaacgacaggtat
cgcgatacggtgcgccgtttctggcgcggcgatgccggcatgttgcccgagttcgccacc
cgctttcatggctccagcgatctgttcgaacacgccgggcgtaaacccgctgccagcatc
aatttcatcaccagccacgacggctttactttgatggatctggtgagctatcgccacaag
cataatcaggccaacggtgagcagaatcgcgacggccacaatgagaactacagcgacaac
tatggccacgagggccagagcgacgagctggcgctcaccgcactgcgtgcccgccagtgc
cgcaacatgctcaccacactgtttatgtctcagggggtgcccatgttgctggccggcgat
gaggtgggtcatagccagctgggcaacaacaacgcctattgccaggacaaccccgccagc
tggctcgattggcgcaaggatatcgacagcgacgaactactgagtttcaccgctaacctc
atcaagctgcgccgccgtttccccatgctgtgccacagagactatatccacgagagtgcc
aaccaggcctccccaggcctcgactggttctgtcgacagggtgagcccatgaccaaggcc
cactggggcgaggcgcagacccgcaccctgagcctagtgatcagcggcgagttggaggcc
caggccgggtgccgtcaggcgctgctgctgatgtttaatgccgacaacaggtctcagcag
ttcaccctgccgagcctcgaggggatagtgcagtggcagtgtctgctcagtacccaggac
agtccccagtatggcgagtccgccagctatcaggccctgctgcagggtgccagtctggtg
ctgcaggaccgtagcctgatgatctattacgcccaatttacctcgttcgcagtagagccc
tcagcggtaaaagagccttcagcgaaagaagagccctcagcgagagaaatgccctcggcc
aaaggagagtctagatga
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