Shewanella alkalitolerans: K0J45_06250
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Entry
K0J45_06250 CDS
T09228
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
shns
Shewanella alkalitolerans
Brite
KEGG Orthology (KO) [BR:
shns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shns03000
]
K0J45_06250
Transcription factors [BR:
shns03000
]
Prokaryotic type
Helix-turn-helix
LysR family
K0J45_06250
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_5
HTH_20
HTH_30
MarR_2
PBP_like
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
QYJ98828
LinkDB
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Position
complement(1405489..1406430)
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AA seq
313 aa
AA seq
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MSLRLQAHLGTLRQMEILLAVYDSGSVSGAADTLHLTQPTISMQLKKLADVIGFPLYNIV
GRKVVFTEAGLEVVKSATEILDSFARLEMSLSDMGELKSGTLRLAVVTTSKYFIPHLLGP
FCERYPNVAVQLNVGNRQQIIERLKQGIDDFYVFSHPPADLNTDSIEFFNNPLVAIAQEN
HPLVSQDGVSLAELCEAPFLMRENGSGTRLAIERFMAKQGVKLNVKMTIESNEAIKHSVM
SGLGVSILSAHTLAFGGNTGLAQLNVKELPINSNWYFLWLKSKRPSAIAQAFLTHVESEG
REMLLTELAKHRL
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcagactacaggcacatcttggtaccctcaggcagatggagatcttgctggct
gtctatgatagcggcagcgtcagcggcgccgccgacaccctgcacctcactcagccaacc
atctcgatgcagctcaagaagctcgccgatgtgataggtttccctctgtataacatagtg
ggtcgcaaggtggtgtttaccgaggccgggctggaggtggttaaatcggccacggagatc
ctcgacagttttgcgaggctggagatgtcgctgtcggacatgggggagctcaaatcgggt
accctgcgcctggctgtggtgaccacctcgaaatactttattccccacctgctcggcccc
ttctgcgagcgctaccccaatgtcgctgtgcagctaaatgtgggcaaccgccagcagatc
atcgagcgcctcaaacagggcatcgacgacttctacgtgttcagtcatccaccagcggat
ctcaacacagatagcatcgaattcttcaataatcccttggtggctattgcccaggagaat
catcccttagtcagtcaggatggcgtctcgttagccgagctctgtgaggcgcccttcttg
atgcgtgaaaatggctcgggcacccgcttggcgattgagcgtttcatggcgaaacagggg
gtgaagcttaacgtcaagatgaccatagagagtaacgaggcgatcaaacactcggtgatg
tcggggctgggggtcagcatactctcggcccataccctcgcctttggcggcaataccggg
ctagcgcagctgaatgtgaaggagctgccgatcaattccaactggtattttctctggctt
aaatcaaaacgtccctcggcaatcgctcaggccttcttgacccatgtggaaagcgaggga
cgtgagatgctactcaccgagctggcaaaacacaggctttag
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