Shewanella alkalitolerans: K0J45_06405
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Entry
K0J45_06405 CDS
T09228
Symbol
bamB
Name
(GenBank) outer membrane protein assembly factor BamB
KO
K17713
outer membrane protein assembly factor BamB
Organism
shns
Shewanella alkalitolerans
Brite
KEGG Orthology (KO) [BR:
shns00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shns02000
]
K0J45_06405 (bamB)
Transporters [BR:
shns02000
]
Other transporters
Pores ion channels [TC:
1
]
K0J45_06405 (bamB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PQQ_2
PQQ_3
PQQ
Beta-prop_LRRK2
DUF6906
flgE_D3
Motif
Other DBs
NCBI-ProteinID:
QYJ98857
LinkDB
All DBs
Position
1435871..1437058
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AA seq
395 aa
AA seq
DB search
MKSWCKTLLACSLSLGLLSACSSNDVEEEPVSPLPQIEASVFPEVSWSASVGSGVGDYYS
KIRPAVRYGKLFVMDRYGEVAAYDEATGEQVWSLEISSWFKEGALSKNKGARLSSGITAA
RNKVFFGGESGLLGAVDAETGEMVWHVTAGGELLSAPTVGEDVVVVHTSTGALEAYNVDD
GKQLWVYESKLPTLTLRGTGSAAYEAGGFFVGTADGKVAVVVKSNGQAAWEQPIYTPKGG
NEFTRMADVDMKPLIVGENIYAVSYNGNLVSMELRTGRVVWSRKYSSFNELASAGLNLYL
VDDHGRVYAVDKRNGLESWSNSELTNRELTSPVVFKDYLVVGDFEGYLHFIDRASGKLVG
RVEVDSSGLFSQPLVIDDKIYVQSRGGKVARITLP
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcttggtgcaaaacattactggcttgcagcttgagcctggggttgctgtcggcc
tgttcttctaacgatgttgaggaagagccggtaagtccgctgccgcagattgaggcgagc
gtctttcccgaggtgagctggagtgcctccgtcggcagtggtgtgggtgattactactct
aagatccgtccggcggtgcgttacggcaagctattcgttatggatcgttacggtgaagtc
gccgcctacgacgaagccacaggtgagcaggtctggtcgctggagatcagctcctggttc
aaagagggcgccttgtctaagaacaagggcgcgcgtctctcttctggcattaccgccgcc
cgtaacaaggtgttcttcggtggtgagagtggcctgctgggagccgtcgatgccgaaacc
ggcgagatggtctggcatgtgaccgcgggcggagagctgctgtctgcgccaactgtgggc
gaagatgtggtggtggttcacaccagcactggcgcccttgaagcctataacgtcgatgac
ggcaaacagctgtgggtctacgagagcaagttgccaaccctgaccctaaggggcacaggt
tctgcggcctatgaggctggtggcttcttcgtcggcaccgccgatggcaaggtcgcggtt
gtggtgaaaagcaacggtcaggccgcctgggagcagcctatctacacgccaaaagggggt
aacgagtttacccgtatggccgatgtggatatgaagccgcttatcgtgggcgagaacatc
tatgcggtgagctataacggtaacctggtctccatggagctgcgtacaggccgtgtggtc
tggagccgtaaatattctagcttcaacgagttggcttcggccggtctgaacctttacctg
gtggatgaccacggccgtgtgtatgcggtcgataagcgtaacggcctagaaagctggagc
aacagcgagctgactaaccgcgaattgacctcgccagtggtcttcaaagactacctggtg
gtgggcgatttcgaaggctatctgcatttcatcgatcgcgcctcaggtaagctggtgggc
cgcgtcgaagtggatagttcaggtttatttagccagccactggtaatagatgataagatc
tacgtccagagtcgcggcggcaaggtagcaagaattacgcttccctaa
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