Shewanella alkalitolerans: K0J45_06700
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Entry
K0J45_06700 CDS
T09228
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
shns
Shewanella alkalitolerans
Pathway
shns02020
Two-component system
shns02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
shns00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K0J45_06700
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
K0J45_06700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shns03000
]
K0J45_06700
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
shns02035
]
K0J45_06700
Transcription factors [BR:
shns03000
]
Prokaryotic type
Helix-turn-helix
Other families
K0J45_06700
Bacterial motility proteins [BR:
shns02035
]
Flagellar system
Flagellar assembly proteins
Others
K0J45_06700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA
bpMoxR
AAA_7
AAA_2
Motif
Other DBs
NCBI-ProteinID:
QYJ98910
LinkDB
All DBs
Position
1506242..1507675
Genome browser
AA seq
477 aa
AA seq
DB search
MMHTDQRILLVGNQSERINRLSCVFEFLGEQVELLAVDKLESRMSNTRYRALVIAQEAQN
KTLLQSIATSMPWQPILLLGSNGDVSAGNVLGCIEEPLNYPQLTELLHFCQVFVQAKRPD
IPTSGNQTKLFRSLVGRSEGIAQVRHLINQVAGSDATVLVLGQSGTGKEVVARNIHYISD
RRDGPFIPVNCGAIPPELLESELFGHEKGSFTGAISARKGRFELAEGGTLFLDEIGDMPL
QMQVKLLRVLQERVFERVGGSKPIHTNVRVIAATHRELETMIANGEFREDLFYRLNVFPV
EMPALCERKDDIPLLLQELVSRVYNEGRGKVRFTQRAIESLKEHSWSGNVRELSNLVERL
TILYPGGLVDVNDLPLKYRHIDVPEYQVQVSEEELERDALASIFSDEVAVDIPESRFPSE
LPPEGVNLKDLLAELEIDMIRQALDQQDNVVARAAEMLGIRRTTLVEKMRKYGMSKD
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgatgcatacagatcaacgaattctacttgtcggtaatcagtcagagcgaattaatcgc
ttatcttgtgtttttgagtttcttggtgagcaggtcgagttgcttgccgtcgacaaactc
gaatctcgaatgtcgaatacccgctatagagcacttgtgattgcacaagaggcgcaaaac
aagaccctgttgcaatctatcgccacctctatgccttggcagccaatcttgttgttgggc
tctaatggcgatgtgtcggcaggcaatgtgttggggtgtatcgaagagccgttaaattat
cctcagttgaccgaactgctgcatttttgccaggtgtttgtgcaggctaagcgtccagat
attcctaccagtggtaaccagacaaaactgtttcgcagcctagtgggccgcagtgaaggt
atcgcccaggtgcgtcacctgatcaatcaggtcgcgggttcagatgctactgtcttagtc
ttaggccagtccggtacaggcaaagaggtggttgctcgcaatatccactatatttccgat
cgtcgtgatggacctttcatccccgtgaactgtggcgccatcccgccagagctactcgag
agtgagcttttcggtcatgagaagggctcatttactggtgctatcagtgcccgtaaggga
cgatttgagcttgccgaagggggaaccctgttcctcgatgagataggcgacatgcccttg
cagatgcaggttaagctgctgcgtgtattgcaagagcgcgtcttcgagcgtgtcggtggc
agtaagcctattcataccaatgtgcgtgtcatcgcggcgactcacagagagcttgaaacc
atgatcgccaatggcgagtttcgcgaagatctcttctatcgcctcaatgtgtttcccgta
gagatgccggccctttgcgagcgcaaagacgatatcccactcttgctgcaagaattagta
agccgcgtctataacgaggggcgtggcaaggtgcgttttacccagcgtgcgattgagtca
ctcaaggaacatagctggtcgggtaacgtgcgtgaactctctaatctggttgagcgtctg
acgatcctctatccggggggcttggtcgacgttaatgacctgccgcttaaataccgccat
atcgatgtgcctgaatatcaggtgcaggtcagtgaagaggagttggaacgcgatgcgttg
gcctctatcttcagcgatgaggtagcggtcgatattcccgagagccgtttccccagtgaa
ctgccaccagaaggcgtgaaccttaaggatctgttggccgagcttgagatcgatatgatt
cgccaggcactggatcaacaagataatgtggtggcacgcgccgcagaaatgcttggcatc
cgccgtaccacactggttgagaagatgcgcaagtatggcatgagcaaagattaa
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