Shewanella alkalitolerans: K0J45_07785
Help
Entry
K0J45_07785 CDS
T09228
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
shns
Shewanella alkalitolerans
Brite
KEGG Orthology (KO) [BR:
shns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shns03400
]
K0J45_07785
DNA repair and recombination proteins [BR:
shns03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
K0J45_07785
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
AAA
Zn_ribbon_3
SLFN-g3_helicase
DUF7577
AAA_16
AAA_22
DZR
zf-tcix
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
QYJ99085
LinkDB
All DBs
Position
complement(1719269..1721008)
Genome browser
AA seq
579 aa
AA seq
DB search
MQLRDYQRQAVDAAINHFKRSDDSALLVLPTGAGKSIVIAELARIAKGRTLVLTHVKELV
AQNAEKVGLLTDEASIFSAGLKQKSTRNKTVVASIQSAVRNPKQFDEPYSLVIIDECHRV
SNEKESQYQQLLSHLRTQNPKLRLLGLTATPYRLGCGWIYRYHYHGKIGNTEQPVFEHCI
FELPMRPLIKQGFLTPPKVLDGLSAQYDFSELSPNASGEYNEAEVDSLLHHAGRATKAIV
EQIKQLTNTRAGTIIFAATVRHAKEIMSLLDSPKAGLITADTPSQERDAIIDAFKRRELS
YLVNVAVLTTGFDAPHVDLIAILRPTASVSLFQQMVGRGLRICEGKRDCLVIDYAANGFD
LFFPEVGRPKPDSKSVPVQVPCPECGFANIFWGLVDGDGDIIEHFGRRCQAVVDNIDGKH
QCNFRFRSKACPNCGEENDIAAKVCQHCQSTLIDPDKRLKEVLQQKHHHLFRCQEMLFEA
DNDRLRVRYLDIEGNDFCCYFNFATKAQIRAFYGVFVHQHTRTPGQKQPTFSKVDQVIAA
RGHFRMPDLLLLKKGKRSWELVERFFDYRGRFDSQHKFV
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
ttgcaactcagagattatcaacgccaagccgtcgatgcggccatcaaccactttaagcgc
agcgatgactccgccctactcgtgctcccgaccggggccggcaagagtatcgtcatcgca
gagcttgcccgcatcgccaaggggcgcaccttggtgcttacccacgtcaaggagctggtg
gcgcaaaacgccgagaaggttggattactaaccgatgaggccagtatcttttccgcaggg
ctgaaacagaaatcgacccgcaacaagacggtggtggccagcattcaatcggcggtgcgt
aaccccaagcagtttgatgagccctattcgctggtgatcatcgatgagtgtcaccgggtc
tccaatgagaaagagagccagtatcagcagctgcttagtcatctaagaacccagaatccg
aaactcaggctgctgggcctgacggcaaccccctatcgattgggctgcggttggatctat
cgctatcactaccatggcaagattggtaataccgagcagccggtgttcgagcactgtatc
ttcgagttgccgatgcgcccgctcattaaacaggggtttctcacgccacccaaggtactt
gatggcctgtcggcccaatatgatttcagcgagctctcacccaatgcaagtggcgaatac
aatgaggccgaagtcgactccctgctgcatcacgcgggccgcgccaccaaggcgatagtg
gagcagataaaacagctcaccaacacccgcgccggcactatcatcttcgcggcgaccgtg
cgtcatgccaaagagatcatgtcgctgctggacagccccaaggcggggctaatcaccgca
gacacacctagccaggagcgcgatgccattatcgatgccttcaaacgtcgcgagctcagc
tacctggtcaatgttgccgttctcaccacaggcttcgacgccccccatgtggatcttatc
gccatcttgaggcccacggcttcagtgagtctgttccagcagatggtcggccggggcttg
aggatctgcgaaggcaagcgggattgcttagtgatcgactacgccgccaacggctttgac
ctcttctttcccgaagttggccgtcccaaacccgacagcaagagcgtgccggtgcaggtc
ccctgccccgagtgtggctttgccaacattttctgggggctggtagacggtgatggcgat
attatcgagcacttcggacgacgctgtcaggccgtggtcgataatatcgacggtaagcac
caatgcaactttcgatttcgctccaaggcctgcccaaattgcggcgaagagaatgatatt
gccgccaaggtgtgccagcattgtcagtcaacgcttatagacccggacaagcgtcttaaa
gaggtgctacaacagaaacatcatcaccttttccgctgccaggagatgctgtttgaggcc
gacaacgacaggctcagggtgcgttacctggatattgagggcaacgatttctgctgttac
ttcaattttgccaccaaggcgcagatccgcgccttctatggcgtctttgtgcatcaacac
acacgtacaccaggccagaaacaacccacctttagcaaggtcgaccaggtgatcgccgcg
cggggccattttcgtatgccggatctgctgctcctcaagaagggcaaacgcagctgggaa
cttgtcgagcgtttcttcgactatcggggccgattcgatagccagcataagtttgtatga
DBGET
integrated database retrieval system
