KEGG   Shewanella alkalitolerans: K0J45_09545
Entry
K0J45_09545       CDS       T09228                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
shns  Shewanella alkalitolerans
Pathway
shns03030  DNA replication
shns03430  Mismatch repair
shns03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:shns00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    K0J45_09545
   03430 Mismatch repair
    K0J45_09545
   03440 Homologous recombination
    K0J45_09545
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:shns03032]
    K0J45_09545
   03400 DNA repair and recombination proteins [BR:shns03400]
    K0J45_09545
Enzymes [BR:shns01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     K0J45_09545
DNA replication proteins [BR:shns03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     K0J45_09545
DNA repair and recombination proteins [BR:shns03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     K0J45_09545
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: QYJ99411
LinkDB
Position
complement(2124616..2125230)
AA seq 204 aa
MSQDAIVVLDFETTGLSPLQGDRAIEIGAVKLQQGVVVDRFQQLMNPGFAVSSFIADYTG
ITNAMLSDAPSCETVMADFADFIQGCHLVAHNASFDQKFLAAEFSRIGLAQSQPFACSLL
LARRLFQAAPNHQLGTLVNYLGIANDGVFHRALNDAEVTGALWLALSDAVSQRWACPAPS
FELMLKLQRQPKHLLEKFMRSYLG
NT seq 615 nt   +upstreamnt  +downstreamnt
atgtcccaagatgccatagtggtattggattttgaaaccacaggcctctcccccttacag
ggcgatcgcgccatcgagataggggcggttaaattgcagcaaggtgtagtggtcgataga
tttcagcaattgatgaatcccggctttgccgtcagtagtttcatcgccgattacacaggg
atcaccaatgcgatgctcagtgatgcaccaagttgcgagaccgtcatggctgactttgca
gacttcatccagggctgtcatctggtggctcataacgccagtttcgatcagaagttttta
gcggcagaattttcgcgcatcggcctggctcaatcccagcccttcgcctgttcgctgctg
ctggcaagacgcctgtttcaggcggcgcctaaccatcagctaggcaccttagtgaattat
ttaggtatcgccaacgatggcgtgtttcaccgcgcgctgaacgacgccgaggtcaccggc
gccttgtggctggcgctgagcgatgcggtatcacagagatgggcctgccctgcacccagt
tttgaattgatgcttaagctgcagcgtcaacctaagcatctgctagagaaatttatgcgg
agctatttaggctaa

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