Shewanella alkalitolerans: K0J45_09960
Help
Entry
K0J45_09960 CDS
T09228
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
shns
Shewanella alkalitolerans
Brite
KEGG Orthology (KO) [BR:
shns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shns03032
]
K0J45_09960 (gyrA)
03400 DNA repair and recombination proteins [BR:
shns03400
]
K0J45_09960 (gyrA)
Enzymes [BR:
shns01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
K0J45_09960 (gyrA)
DNA replication proteins [BR:
shns03032
]
Prokaryotic type
DNA Topoisomerases
K0J45_09960 (gyrA)
DNA repair and recombination proteins [BR:
shns03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K0J45_09960 (gyrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QYJ99491
LinkDB
All DBs
Position
2228171..2230810
Genome browser
AA seq
879 aa
AA seq
DB search
MTDLASSITPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSMRYTLVDGQGNFGSVDGDAAAAM
RYTEIRMDKLAHQLLADLEKETVDYVPNYDGTEQIPAVLPTRIPALLVNGSSGIAVGMAT
NIPPHNLSEVISGCLALIDEPSLSIEQLMEHIPGPDFPTAAIVNGRKGIEDAYKTGRGKA
VMRARATVETEDNGRERIIVTEIPYQVNKARLIEKIAELVKDKKIEGISGLRDESDKDGM
RIVIEVKRGEVGEVILNNLYAQTQLQTSFGINMVALTNGQPKLFNLKEMLECFILHRREV
VTRRTVFELRKARERAHILEALAIALANIDPIIALIKASPTPAEAKTKLVSQGWALGNVQ
GMLEKAGDDAARPEWLSAEFGIRDGLYYLTEQQAQAILDLRLHKLTGLEHEKILSEYEEL
LELIAALLYILRSPERLMEVIKEELQEVLEVFGDERRTELNASAVDISLEDLINEEDVVV
TLSHLGYAKYQPLSDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCFSDFGKMYW
LKVYQLPLASRQARGRPIINLLPLAEGERITAILPVREYDADKYVIMATSHGTVKKTSLD
QYSRPRANGIIAVNLKDGDQLIGVDITNGDNEVMLFSNEGKVVRFSEDQVRGMGRTATGV
RGIKLEDGQSVVSLIVPKNDGAILTVTENGYGKRTELDEYPAKSRATKGVVSIKVSERNG
AVVGAVQVLENDEIMLISDKGTLVRTPASGVSTIGRNTQGVTIIRTATDETVVGLQRIDE
IQDEQEFDEEGNPIITDTVEEHQVEGEAPEAEPDVEPNE
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctggcttcatctataacaccaattaatattgaagacgaattaaagaattca
tatttggattacgccatgagcgtgatcgttggccgtgcgttacccgatgtacgtgacggt
ctaaagccggttcatcgccgcgtattattcgcgatgaacgagttgaagaacgattggaac
aaaccttataaaaagtcggcgcgtgtcgtcggtgatgttatcggtaaatatcacccacac
ggtgactctgcggtttacgacactatcgttcgtatggcgcagcctttctctatgcgctac
accttggtcgatggtcagggtaactttggttcggtcgatggtgacgctgcggcggccatg
cgttataccgaaattcgtatggacaagttggcgcatcaactgctggctgacctagagaaa
gaaaccgtcgactacgtacctaactatgatggtactgagcagatcccagcggtattgcca
acccgtattccggccctgctggtaaacggctcatcgggcatagccgtaggtatggcgacc
aacattcctcctcataacctgtcagaagtgatctccggctgtttggcactgatcgatgag
ccaagtctctctatcgagcagttgatggaacatattccagggccagatttcccaacggcg
gcgatcgtcaacggccgtaagggtatcgaagatgcctataagacgggtcgtggtaaggcg
gtcatgcgtgcccgcgcaaccgttgagactgaagacaacggtcgtgagcgcattatcgtt
accgagatcccgtatcaggtgaacaaggcgcgtctgatcgagaagatcgccgagctggta
aaagataagaagatcgaaggcatcagtggcctgcgcgacgagtctgacaaagacggtatg
cgtatcgttatcgaagtgaagcgtggcgaagtgggtgaggtgatcctcaacaacctgtat
gcccagactcagctgcaaacctctttcggtatcaacatggtggccctgaccaatggtcag
cctaagctgtttaaccttaaagagatgctcgagtgcttcatccttcaccgtcgtgaagtg
gtgacccgtcgtaccgtattcgaactgcgtaaggctcgcgaacgtgctcatatccttgaa
gcactggcgattgcactggctaacatcgaccctatcatcgcacttatcaaggcatcgcca
acaccggccgaagccaagacaaagctggtttctcaaggctgggcccttggcaatgtacaa
ggcatgctggagaaggccggtgatgatgcggcgcgtcctgagtggctgtcggcagaattc
ggtattcgtgatggtctctactacctgaccgaacaacaggctcaggcgattctagacttg
cgtctgcataagctgaccggtttggaacatgagaagatcctaagcgaatatgaagagctg
ctagagctaatcgctgctctgctatatatcctccgcagccctgagcgtctgatggaagtg
attaaagaagagcttcaggaagtgctggaagtgtttggcgatgagcgccgcaccgagctt
aacgcctctgcggtcgacatcagcctcgaagatctgatcaacgaagaagatgtggtagtg
accctgtcgcatctgggttacgccaagtatcaaccattgagcgattaccaggcccagcgc
cgtggtggtaagggtaaggccgcgactaaggtgaaggatgaagatttcgtcgagaaactg
ctggttgccaacacccacgataccatcttgtgtttctctgacttcggtaagatgtactgg
ctcaaggtgtaccaactgccgctggcaagtcgtcaggcccgtggtcgtcctatcatcaac
ctgctgccgctggcagaaggtgagcgcatcaccgctatcttgccggtgcgtgaatatgac
gccgacaaatatgtgatcatggcgacctctcacggcaccgtgaagaagacctcgctggat
caatactctcgtccgagagccaatggtatcatcgccgtgaacctgaaagatggcgatcag
ctgatcggtgtcgacatcactaacggtgacaacgaggtaatgctcttctctaacgaaggt
aaggttgttcgctttagcgaagatcaggttcgtggcatgggccgcaccgcaacaggtgtt
cgcggtatcaagctcgaagatggccagagcgtagtctcgctcatcgtacctaagaacgac
ggagctatcctgaccgttaccgagaacggctatggtaagcgtaccgagctggatgaatac
ccagctaagagccgcgcgaccaagggggtagtatcgatcaaggtgagcgagcgtaacggc
gccgtcgtcggggcggtacaagtactcgaaaacgacgagatcatgttgatcagcgataag
ggtaccctggttcgtacaccggcatctggcgtatcgactattggtcgtaacactcaaggt
gtgaccattatccgtacggcaaccgacgagacggtcgttgggctgcagcgtatcgacgag
atccaggatgaacaggagtttgacgaagagggcaaccctatcatcacggatactgtcgaa
gagcatcaagtcgaaggcgaagcgcccgaggccgagccagacgttgagccaaatgaataa
DBGET
integrated database retrieval system
