Shewanella alkalitolerans: K0J45_10730
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Entry
K0J45_10730 CDS
T09228
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
shns
Shewanella alkalitolerans
Pathway
shns00730
Thiamine metabolism
shns01100
Metabolic pathways
shns01240
Biosynthesis of cofactors
Module
shns_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
shns00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
K0J45_10730 (thiC)
Enzymes [BR:
shns01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
K0J45_10730 (thiC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QYJ96048
LinkDB
All DBs
Position
complement(2391885..2393921)
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AA seq
678 aa
AA seq
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MSTRREMRAEAQAFIDNLKPLQHPNSQKFYLSGSRPDLKVAMRQIFQSDTLIGGTAEAPV
YEKNPPITVYDCAGPYSDPEADIDVRRGLVKLRSEWIAERGDTQELEQVSSGFTQQRLAD
EGLDHLRFEQLPKPRRALEGKVVTQMHYARRGIISPEMEYVALRENMARETVTDEVLNQR
APGESFGAKLGKPITPEFVRQELAAGRAILPLNINHPEAEPMIIGRNFLVKVNANIGNSA
VTSSIEEEVEKLVWATRWGADTVMDLSTGRYIHETREWIIRNSPVPIGTVPIYQALEKVN
GVAEDLTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWCL
SHHKENFLYEHFDEICQLCAAYDVSLSLGDGMRPGSIADANDEAQFAELETLGELVKKAW
QYDVQTIIEGPGHIPMQLIKENMDKQLELCDEAPFYTLGPQTTDIAPGYDHFTSGIGAAM
IAWYGCAMLCYVTPKEHLGLPNKEDVKQGLIAYKIAAHAGDVAKGHPGAQIRDNALSKAR
FEFRWEDQYNLGLDPDTARAYHDESLPQESAKVAHFCSMCGPKFCSMKITQEVREYAAAQ
AIEVREIEVEQIDVTASAPKAEIQQGMAQMSAQFKQSGSELYHSAVKQSPGVESASLEST
TFESTALEITALEKAEEV
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacacgtcgtgaaatgcgagcagaggcccaggcctttatcgataacctcaaaccc
ctacaacaccctaattcgcaaaaattttacctaagcggcagcaggccagatctcaaggtc
gcgatgcggcagatctttcagtcagacaccctgattggcggcacggctgaggcgcctgtc
tatgagaagaatccccccatcacagtctatgactgcgccgggccctattcagatcccgag
gctgatatcgatgtgcgtcgtggtcttgttaagctgcgcagcgagtggatcgccgagcgc
ggcgatacccaagaactcgagcaggtaagctcaggttttacccagcagcgtctggccgat
gaggggctagatcatctgaggtttgagcagctgcccaagccaagacgcgcccttgaaggc
aaggtggtgactcagatgcactacgccagacgcggcatcatcagccccgagatggagtat
gtggccctgcgtgagaacatggcacgcgagacagtgaccgacgaggtgctaaatcagcgc
gcgccgggtgagagtttcggcgccaagctaggtaagccgatcacgccagagtttgtgcgt
caggagttggcggcaggccgggcaatcttaccgcttaacatcaaccaccctgaggctgaa
cctatgatcatcggccgtaatttcctggtgaaggtcaacgccaacataggtaactcggcg
gttacctcctctatcgaagaggaggtggagaagctggtgtgggccacccgttggggcgcg
gataccgtgatggacctttcgaccggtcgctatatccatgagacccgcgagtggatcatc
cgtaactcgccagtgcccatcgggactgtgcccatctatcaggcgctggagaaggtcaat
ggcgtcgccgaagatctcacctgggagatcttcagagataccctgatcgagcaggcggag
cagggggtggattattttaccattcacgccggtgtgctcctgcgctatgtgcccatgacg
gccaagcgcctcacaggcatagtctctcgtggcggttccatcatggccaagtggtgcctc
tctcaccacaaggaaaacttcctctatgaacacttcgatgagatctgtcagctgtgcgcc
gcctacgatgtctccctctcgttgggtgatggcatgcgaccaggctccatcgccgatgct
aacgacgaggcgcagtttgccgagttggaaaccttaggcgagctggttaagaaggcctgg
cagtatgacgtgcagaccatcatcgaagggccgggtcatatcccgatgcagcttatcaag
gagaacatggataagcagctcgagctgtgtgacgaggcgccgttttataccctaggccct
cagaccaccgacattgctccaggttatgatcacttcacctcaggcataggggcggcgatg
atcgcctggtatggctgcgccatgctctgctacgtgacgcccaaggagcatcttggtctg
ccaaacaaggaagatgttaagcaggggctgatcgcctataagattgccgcccatgccggc
gatgtagccaaggggcatcctggcgcgcagatccgcgacaacgccttgtctaaggcgagg
ttcgagttccgctgggaagatcaatacaacctggggctggatcccgataccgccagggcg
tatcacgacgaatcacttccgcaggagtcggccaaggtagcccatttctgctccatgtgc
ggtcccaagttctgctcgatgaagatcacccaagaagtgcgcgaatacgccgcggcccaa
gcgattgaggtgagggagattgaggttgagcagattgacgttactgctagcgcgccaaag
gcagagatccagcaagggatggcgcagatgtcggcgcagtttaagcaaagtggcagcgag
ctctatcacagcgcggtgaagcaaagccctggcgttgaaagcgcctctcttgaaagtacc
acttttgaaagtactgctcttgaaattacggctctcgaaaaagcagaagaggtgtag
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