Shewanella alkalitolerans: K0J45_11200
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Entry
K0J45_11200 CDS
T09228
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
shns
Shewanella alkalitolerans
Pathway
shns00061
Fatty acid biosynthesis
shns00071
Fatty acid degradation
shns01100
Metabolic pathways
shns01212
Fatty acid metabolism
shns02024
Quorum sensing
shns04146
Peroxisome
Module
shns_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
shns00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
K0J45_11200 (fadD)
00071 Fatty acid degradation
K0J45_11200 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
K0J45_11200 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
K0J45_11200 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
shns01004
]
K0J45_11200 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shns04147
]
K0J45_11200 (fadD)
Enzymes [BR:
shns01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
K0J45_11200 (fadD)
Lipid biosynthesis proteins [BR:
shns01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
K0J45_11200 (fadD)
Exosome [BR:
shns04147
]
Exosomal proteins
Exosomal proteins of breast milk
K0J45_11200 (fadD)
Exosomal proteins of breast cancer cells
K0J45_11200 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
Motif
Other DBs
NCBI-ProteinID:
QYJ96133
LinkDB
All DBs
Position
complement(2514839..2516512)
Genome browser
AA seq
557 aa
AA seq
DB search
MEQLWTKNLPHDVPAIIDAKQYSSLIDLFESSVAKYADQPAFVNMGATLTYRKLEERSRA
FAAYLQNELKLQKGDRVAIMMPNLLQYPIALFGILRAGMVVVNVNPLYTPRELKHQLNDS
GAKAIVVVSNFANTLEQVVEQTPVKSVILTGLGDLLSAPKRTLVNFVVKYIKKMVPKYHL
PHAISMRQSLSKGRRLQYVKPTIKGDDIAFLQYTGGTTGVSKGAMLTHGNIVSNLLQADA
AYSPLLADGKEFVVTALPLYHIFALTVNCLLFLHKGANNLLITNPRDIPAFVSELKKHPF
TALTGVNTLFNALVSSEEFKTLDFSNLKLSIGGGMAVQRAVADKWQGITKTRLLEGYGLT
EASPLLTCCPYNLEGYNGSIGFPVANTDMQVRDEEGNVLPQGETGELFAKGPQVMKGYWQ
RPEETAKVIDKDGYLATGDIGYMDEQGFFFIVDRKKDMILVSGFNVFPNEVEEVVALHPK
VLEVAAVGVPHEVSGELVKVFVVPKDKSLTEEQVIKHCRHHLTGYKIPKLVEFRDELPKS
NVGKILRRELRDEAKSA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
gtggaacagctttggacgaaaaatttaccccatgatgtgcccgctattatcgatgcaaag
caatacagctcgctgatcgacctgtttgaaagctcggtagccaagtatgccgatcagccc
gcttttgtgaacatgggcgcgacgttgacctatcgaaaactcgaagagcgcagccgtgcc
tttgcggcttatctgcaaaacgaactcaagctgcagaagggcgatcgcgtggcgatcatg
atgcctaacctgctgcagtatcccatcgccctgtttggcatattgcgtgccggcatggtg
gtggtcaacgtgaaccctctgtataccccaagagagttgaagcatcagctcaacgactcg
ggtgccaaggctatcgtcgtggtatctaactttgccaacaccctggaacaggtggtggag
cagacgccggtgaagagcgtgatcctcacaggtcttggcgacttgctcagcgcgcctaag
cgcaccctggtgaactttgtagtcaagtacatcaagaagatggtgcctaagtatcatctg
ccacatgccatctctatgcgtcagtcgctctctaagggacgccgccttcagtatgtaaag
ccgaccatcaagggggacgatatcgccttcttgcaatataccggcggcaccacaggtgtg
tctaagggcgccatgctgacccatggcaatatcgtcagcaacctgctgcaggccgacgcg
gcctattcgccgctgctggccgatggtaaggagtttgtggttaccgcgctgccgctgtat
cacattttcgccctgacggtgaactgtctcttgttcctccacaaaggcgcgaacaacctg
ctgatcactaacccaagggatatccctgccttcgtgtctgagctgaagaagcatccattc
acggcgctcaccggcgtgaacaccttgtttaatgccctggtgagctcggaagagtttaag
acgttggatttctccaaccttaagctctctatcggtggcggtatggcggtgcagcgcgcc
gtggccgataagtggcaggggatcactaagacacgtctgctggaaggttacggcctgacc
gaagcctcgccgctgctgacctgttgcccctataacctagagggctacaacggctctatt
ggtttcccggtcgccaataccgacatgcaggtgcgcgacgaggagggcaatgtgctgcct
cagggcgagaccggcgaactgtttgccaagggccctcaggtgatgaaaggctactggcag
cgcccggaagagacggccaaggtgatcgataaggatggctacctggccaccggcgatatc
ggttacatggatgagcaaggcttcttctttatcgtggatcgcaagaaagatatgatcttg
gtctctggctttaacgtcttccccaacgaggtggaagaggtggttgccctgcatcctaag
gtgctggaagtggcggccgtcggcgttccccatgaggtgagcggcgagctggtgaaggta
tttgtggtaccaaaagacaaatctttgaccgaagagcaggtgatcaagcactgtcgtcat
catttgacgggatataaaattcctaagctggtagaattcagggatgagctacctaagagc
aacgtgggcaagatcttacgccgcgagttgcgtgacgaagccaaatcggcctag
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