Shewanella alkalitolerans: K0J45_11470
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Entry
K0J45_11470 CDS
T09228
Symbol
rluB
Name
(GenBank) 23S rRNA pseudouridine(2605) synthase RluB
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
shns
Shewanella alkalitolerans
Brite
KEGG Orthology (KO) [BR:
shns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shns03009
]
K0J45_11470 (rluB)
Enzymes [BR:
shns01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
K0J45_11470 (rluB)
Ribosome biogenesis [BR:
shns03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
K0J45_11470 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QYJ96183
LinkDB
All DBs
Position
complement(2589362..2590228)
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AA seq
288 aa
AA seq
DB search
MSEKLQKVLARAGHGSRREMEAWIAAGRVSIDGEIAKLGDRIEADAKVRIDGRTVSIKSE
DDLVCRVIAYHKPEGEICSRKDPEGRPTVFDRLPKTRDSRWVAVGRLDINTSGLLLFTSD
GELANRLMHPSHEVEREYAVRTFGEVTDACIQRLRSGVTLEDGPAHFDKVKPAGGEGMNK
WWHVSLAEGRNREVRRLWESQEVQVSRLIRIRYGMIDLPKSLPRGGWVELPIEQVNYLRK
LAGMDEETRTLLGTDKHSVARAKVKSAKIRRAVRKHKTTAGKTPRQRS
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaaattgcagaaagtcttggcccgtgcaggccatggctcccgtcgtgagatg
gaggcatggattgctgcaggccgagttagtatagacggtgaaattgccaaacttggcgat
cgtatcgaggccgatgccaaggtgcgtattgatggtcgtacggtatcgattaagtcggaa
gacgacttggtatgccgcgtgatcgcctatcacaagcctgaaggggagatctgcagtcgc
aaagatcccgaagggcgtccgacggtattcgaccgtctgcctaagacccgagattctcgc
tgggtggcggtaggtcgcctggatatcaacacctcaggcttgttgctgtttacctcagac
ggtgagctggctaaccgcctgatgcacccgtcccatgaggtggagcgtgaatacgccgtg
cgtacctttggtgaggtgaccgacgcctgcattcagcgtctgcgcagcggcgtaaccttg
gaagatggcccggctcattttgacaaggtgaagcctgctggtggcgagggcatgaataaa
tggtggcatgtgtcgctggccgaaggccgtaaccgcgaggttcgccgcttatgggaatcg
caggaagtgcaggtgagccgcctgatccgcattcgctacggcatgatagatctgcctaaa
tccctacctcgcggtggttgggtcgagctgccaatcgagcaggtgaactatctgcgtaag
ttagccggcatggatgaggagacgcgcaccctgctgggcacagacaaacacagtgtggcc
cgcgccaaggtgaaaagcgccaagatccgccgcgctgtgcgtaagcacaagaccacagcg
ggtaaaacgccgcgtcaaagaagctag
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