Shewanella alkalitolerans: K0J45_12890
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Entry
K0J45_12890 CDS
T09228
Symbol
clpX
Name
(GenBank) ATP-dependent protease ATP-binding subunit ClpX
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
shns
Shewanella alkalitolerans
Brite
KEGG Orthology (KO) [BR:
shns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
shns03110
]
K0J45_12890 (clpX)
Chaperones and folding catalysts [BR:
shns03110
]
Heat shock proteins
HSP100
K0J45_12890 (clpX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
zf-C4_ClpX
AAA
ClpB_D2-small
AAA_5
Mg_chelatase
AAA_22
RuvB_N
MCM
Sigma54_activ_2
AAA_7
AAA_14
Sigma54_activat
AAA_16
AAA_24
TIP49
IstB_IS21
AAA_18
DEAD
NACHT
T2SSE
ABC_tran
AAA_28
nSTAND3
AAA_33
PduV-EutP
TsaE
ResIII
AAA_15
AAA_23
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QYJ96439
LinkDB
All DBs
Position
complement(2928302..2929582)
Genome browser
AA seq
426 aa
AA seq
DB search
MGDNKSNGDSGKLLYCSFCGKSQHEVRKLIAGPSVYVCDECVELCNDIIREEIREISPKQ
DQDRLPTPHELRAHLDDYVIGQEKAKKVLSVAVYNHYKRLKNATPKDGVELGKSNILLIG
PTGSGKTLLAETLARFLNVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRG
IVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQEFLQVD
TSKILFICGGAFAGLEKVIEQRSHVGTGIGFGAEVKGEADKATISDVLLQVEPEDLVKYG
LIPEFIGRLPVLATLAELDEAALIQILSEPKNALTKQFAALFEMEGVELEFREDALKAIA
LKAMDRKTGARGLRSIVEGILLDIMYDLPSTENVAKVVIDESVVKGESAPILIYEANETQ
AAVAEQ
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacaacaaaagtaacggtgatagtgggaaactgctgtactgctctttttgtgga
aagagtcagcatgaggttcgtaagctcatcgccggcccttctgtgtatgtatgtgacgag
tgtgtagagctttgcaacgatattatccgtgaagagatccgtgagatatcgccaaagcaa
gatcaagatagattacctacgccacatgagctcagagcgcatcttgatgactatgtcata
ggtcaagagaaggctaagaaagtcttatctgttgctgtatataaccactataagcgttta
aaaaatgccacccctaaagatggtgtcgagctgggcaagagtaacatcttgctgatcggc
ccaaccggtagtggtaagacgctgcttgccgagaccttagctcggttcttgaatgtgcct
tttaccatggccgatgccaccaccctgaccgaggccggttatgtgggtgaggatgtcgag
aacatcattcagaagctgctgcagaagtgcgactacgatgtcgagaaggcccagcgtggt
atcgtctatatcgatgagatcgataagatcagccgcaagtcagataacccatcgatcacc
cgtgacgtgtccggtgaaggcgtgcagcaggcgctgcttaagctgatcgaaggcactgtg
gctgccgtaccgccccaaggcggacgtaagcatcctcagcaggagttcttgcaggtcgat
acctctaagatcctcttcatctgtggcggcgcctttgcgggcctagagaaggtgatcgag
cagcgctctcatgtcggtaccggcataggtttcggcgccgaggtgaaaggcgaggccgat
aaggccactatctctgacgtattgctgcaggttgagcctgaagatctggtgaaatatggt
ttgatccctgagttcatcggtcgtctgcctgtactggctaccctggccgagctggatgaa
gcggcattgattcagatcctgtctgagccaaagaacgcgctgactaagcagtttgccgcc
ctgttcgagatggaaggggttgagcttgagttcagagaagatgcgctcaaggcgattgcc
ctcaaggcaatggatcgtaagacaggtgctcgcggtctgcgttcaatcgtcgaaggcatt
ctactggacatcatgtatgacctgccatcaaccgagaacgtggccaaggtggttatcgat
gagtcagtggttaagggcgagtccgctcctatcctcatctacgaagccaatgagacgcaa
gccgcggtggctgaacaataa
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