Shewanella alkalitolerans: K0J45_13010
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Entry
K0J45_13010 CDS
T09228
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K02647
carbohydrate diacid regulator
Organism
shns
Shewanella alkalitolerans
Brite
KEGG Orthology (KO) [BR:
shns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shns03000
]
K0J45_13010
Transcription factors [BR:
shns03000
]
Prokaryotic type
Helix-turn-helix
Other families
K0J45_13010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
HTH_8
HEAT_2
GAF
GAF_2
Motif
Other DBs
NCBI-ProteinID:
QYJ96459
LinkDB
All DBs
Position
2961565..2962728
Genome browser
AA seq
387 aa
AA seq
DB search
MYFLDNQLAQQIVDRTMAIIGHNINVMNSQGVILGSGEPHRIGSTHEGALLAISQNRTVE
LNSASAASLQGVKPGINLPLHYQGEIIGVIGITGEPEHLKAFGELLKMTAEMIVEQANSL
NVAQWRARQQEEFILQLIKPEGRDLSHLKIWAQRLDIDLEMPRVAAVLRISDDAGDELAN
SQLKTVLHLLETPSRGNLIAMTSMTELVILKPAFLDGKAWSAEAESLRIDRLLKRLPSEL
NARLKISLGHYFPATMDINRSYQTALETLNFGQQLHPEQSKYLYEDHALLVMLSGLKHDW
RGEQLLRPFQRLIDRDKNALLRKTLASYLGHFGDQQACAKALFIHRNTLRYRLDKIAQIT
KVDIQKLDGLLQLYLGQVLLSRGQDQG
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
ttgtactttctcgataatcaactcgcccagcagatagtcgatcgcaccatggcgatcata
ggacacaacatcaatgtgatgaacagccagggggtgatcctcggctcgggcgagccccat
cgcattggctccacccatgagggggccctactggccatcagtcagaaccgcaccgtggag
cttaacagcgccagcgccgccagcttgcagggggtcaagcccggcatcaatctgccgctg
cactatcagggggagatcataggcgtcatcggcatcacgggagaacccgaacacctcaaa
gccttcggtgagctattgaagatgaccgccgagatgatcgtcgagcaggccaactcactg
aatgtggcccagtggcgcgcccgccagcaggaggagtttatcctgcagctgataaagccc
gaggggcgggacctcagccacctgaagatctgggcccagcgtctggatatcgatctcgag
atgccaagggtcgcggccgtgctgcgtatcagcgacgacgccggcgacgagctggccaac
tcccagctcaagacggtactgcatctgttagagacgccgtcacgcggcaacctgatcgcc
atgacctctatgactgagctggtgatcctcaaacctgccttcttagacggcaaggcctgg
agcgccgaggccgagagcctgcgtatcgaccgtctgctcaagcgtctgcccagcgagcta
aacgccagattgaagatttccctgggccactactttcccgccaccatggatatcaaccgc
tcctatcagacggcgctggaaaccctcaattttggccagcagctgcacccagagcagagc
aagtatctgtatgaagatcatgccctcttggtgatgctctcggggcttaaacatgactgg
cgcggcgagcagctgctgaggccgtttcagcgcctcatcgacagggacaaaaacgccctg
ctgcgcaagacactggccagctatctggggcatttcggcgaccagcaggcctgcgccaag
gcgctgtttatccaccgcaacaccctgaggtatcgcctggataagatagcccagatcact
aaggtggatattcaaaaactcgacggcctgctacagctctacctgggccaggtgctgcta
agccgcggccaggaccaaggctaa
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