Shewanella alkalitolerans: K0J45_13710
Help
Entry
K0J45_13710 CDS
T09228
Name
(GenBank) 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA
Organism
shns
Shewanella alkalitolerans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FabA
ketoacyl-synt
Ketoacyl-synt_C
KAsynt_C_assoc
ACP_syn_III
Motif
Other DBs
NCBI-ProteinID:
QYJ96587
LinkDB
All DBs
Position
3129319..3135105
Genome browser
AA seq
1928 aa
AA seq
DB search
MPSNEAPSAKQVPPKTRGHGKIAIVGLANLYPDAKTPKQFWQNLLDKRDSRTQLSDDKLG
AHLADYRGEQGEADRFYCDKGGYIEDFHFNPYGYKLPPEQLQGMDDSLLWALDTSRNALL
DAGIALDSPQLSRCGIIMGTLSFPTAKSNELFLPLYHKAVEKALKQKLACPDFSLSDYNA
HRPAANTLDVANGAIAHNASKLMADALGLGRVQLSLDAACASSVYSLKLACDYLNTGKAD
LMLAGAVSGADPFFINMGFSIFHAYPEHGFSAPFDRNTKGLFAGEGAGVLALKRLEDAER
DNDKIYAIVSGIGLSNDGKGQFVLSPNSKGQIKAFERAYRHSGVEPKQIEVIECHATGTP
LGDKVELASMEQFFAPRLEGASAPMIGSAKSNLGHLLTAAGMPGIMKMIFAMNQGQLPPS
INLSEAIESPNGLFGAHTLPSQVTPWPVKVDNAARLAGVSVFGFGGCNAHLLLESYTPTE
CEPSTIATSPQLTPPCHNGSTPQFVISGIAAHLGPLGSINALDTCIRHEQEAFVPLPPAR
WKGLDQHPELLAQFGLDSAPQGAYVDSFELDFLRFKLPPNEDDRLIGQQLMLMKVADEAI
RDAALQPGQKVAILVAMETELELHQFRGRVNLHTQLKQSLDAMGTSLSDSQYRELEALAM
DSVLDAAKLNQYTSFIGNIMASRIASLWDFSGPAFTISAGEQSVGRALDVAENIMVQEQL
DAVVIAAVDLCGSLEQVMLKNAIAPVASQSHPNGWRLAEGAGALVLETSSHQSQRGASAY
GKIESLNFGPQHQLARLCDELLTLNGTDADQISMVEMNVAPCSQHQPQQLIAQLPTAQAR
LVQSNQQLGHSFAAAGMTSLIATLLRMTQESAGNALVANFSEDQSALLHLTQTHAQRSAL
TQRLDQDLTTHEGRSLIKRVTLGGRGIIEHILTQPLTQLSALQDKLAATNGQVQTKPKKV
AKLISYLGQVNSNTTQASQFATPSMTGGATGNLPTMTQHSAQLPGSPISNPDLSAFHDNQ
QKARQAHLAFLKSRESGLKVADLLLKQQLAQAIGSPSAPAAASSVTQMPLRPRHDLVAPY
RAPVPAHKPCIWDYHDLVEYAEGDIAKVFGPDYSVIDGYSRRVRLPTTDYLLVSRVTKLD
AKLGEYKPSTMTTEYDIPVGAPYLVDGQIPWAVAVESGQCDLMLISYLGIDFENKGERVY
RLLDCTLTFLGDLPRGGDTLRYEIKINNFARNGDTLLFFFSYECFVGDTMILKMDGGCAG
FFTDAELADGKGVIRTEEELLARSRAAKQTFNPLLDCPRTQFSYGDIHKLLSADIQGCFG
PSHTGSAQPSLCFASEKFLMIEEVSKVERNGGAWGLGLVEGHKQLEPNHWYFPCHFKDDQ
VMAGSLMAEGCGQLLQFYMLHLGMHTQTQNGRFQPLENASQKVRCRGQVIPQSARLTYRM
EVTEIGFSPRPYAKANIDILLNGKVVVDFHNLGVMIKEESECTRYPALESSDTSSAQATS
AQGASANAPLMTNAPLMAQIPDLSAAPNKGVIPLTHVEAPVTPDYPNRVPDTVPFTPYHL
FEFATGDIEKCFGPEFAIYRGMIPPRTPCGDLQLTTRVIEVNGQRGDFKRPASCIAEYEV
PSDAWYFDANSHQALMPYSVMMEIALQPNGFISGYMGTTLGFPGLELFFRNLDGSGELLR
QVDLRGKTIVNDSRLLSTVMAGTNIIQSFSFELNTDGEPFYRGTAVFGYFKAEALKDQLG
LDNGKVTQPWHQAKGIAPDIKVNLLDKGGRHFNAPTGQPHYRLAGGQLNFIDSVEIVDNG
GTHGLGYLYAERTIDPSDWFFQFHFHQDPVMPGSLGVEAIIETMQTYAISKDLGAGFTNP
KFGQILSNIKWKYRGQINPLNKQMSMDVSITSVKEDAGKLVITGNASLSKDGLRIYEVSD
IAICIEEA
NT seq
5787 nt
NT seq
+upstream
nt +downstream
nt
atgccttcaaatgaagcgccttctgccaaacaagttcccccaaagacccgaggtcatggc
aagattgccatcgtgggtctggcaaacctctacccagacgccaagacccctaagcagttt
tggcaaaacctgctcgacaaacgcgactctcgcacccaactcagcgatgacaagctcggc
gcccacttagccgactatcgtggcgagcagggcgaggccgatcgcttctactgcgacaag
ggcgggtatattgaagattttcactttaatccctatggctataaactgccgcccgagcag
ctgcaggggatggacgatagcctgctgtgggcgctggacaccagtcgcaatgccctgctc
gatgcgggcattgccctggactctcctcagctatcacgctgcggcatcatcatgggcacc
ctctctttccctacggcaaaatcgaatgagctgtttctgcccctctaccataaggcggta
gaaaaagcccttaagcagaagctggcctgcccagatttcagcctgagcgactataacgcc
catcgccccgcagccaacaccttagacgttgccaatggtgccatcgcccacaacgcctct
aagctaatggccgatgcccttggccttgggcgcgttcaacttagcctggatgccgcctgc
gccagctctgtctattcgctgaaactggcctgcgactatctcaacacgggcaaggccgat
ctcatgttggcgggcgccgtctccggcgccgaccctttctttatcaacatgggcttctcc
atcttccatgcctatccagagcatggcttctcggcccccttcgatcgcaataccaagggg
ctgtttgccggagaaggcgccggggtactggcactcaaacgcctcgaagacgccgagcgt
gataatgataagatctacgccatcgtcagcggcatcggcctgtctaacgacggcaaggga
cagtttgtactcagccccaacagtaaggggcagatcaaggccttcgagcgtgcctatcgc
cacagtggcgtcgagcctaaacagatagaggtgatcgagtgtcacgccacgggcaccccg
ctgggtgacaaggtagagctagcctctatggagcaattttttgcccctcggctcgaaggt
gcgagcgcgcccatgataggttcggccaagtccaacttagggcatttacttacggccgcg
ggcatgccggggatcatgaagatgatctttgccatgaatcagggccagctgcccccaagc
atcaatctcagtgaggccatcgaatcgccaaacggcctatttggcgctcataccctgccc
agtcaagtgaccccttggccggttaaggtcgataacgcagcgcgattagccggggtgtcg
gtatttggcttcggcggctgtaatgcccatctgttgttagaatcctatacacccacagag
tgcgagccttcaaccatagcgacatcgccgcagttaacgccaccttgtcacaacggctcg
acgccgcaatttgtgatcagtggcattgcggcgcatctcggtccacttggcagcattaac
gccctcgacacctgtattcgccatgagcaagaggcctttgtgcccctgccaccagcgcgc
tggaaagggttagatcagcacccagaactgctagcgcaatttggcctggactcggctccc
caaggcgcctatgtggatagcttcgagctggatttcctgcgctttaaattgccacccaat
gaagacgatcgccttatcggccaacagctgatgctgatgaaagtcgccgacgaagccata
cgcgacgcagcgttacagccagggcaaaaagtggccatcttggtcgccatggagacagag
ctggaactgcaccagttccgcggccgggtaaacctgcacactcagctcaaacagagtctg
gatgccatgggcaccagcctgagcgacagccaatatcgcgagcttgaggccctggccatg
gacagcgtgctcgacgccgccaagctaaaccaatacaccagctttatcggcaacatcatg
gcctcgcgtatcgcctccctgtgggacttcagcggtccggccttcaccatctccgccggc
gagcaatcagtaggccgcgccctggatgtggcggaaaatatcatggtgcaggagcagctt
gatgccgtggtgatcgccgcggtcgatctctgtggcagcctggagcaggtgatgctgaaa
aatgctatcgcccccgtggccagtcagagccatccaaacggctggcgactggcggaaggc
gccggcgccctggtgctggaaacctcatcccaccaaagccagcgtggcgctagcgcctat
ggcaagatagagagcctcaactttggtcctcagcatcaattagcgcgcctatgcgatgag
ctattgaccctcaatggcactgatgccgatcagatctcaatggtcgagatgaatgtggca
ccttgcagccagcatcagccccaacagctgatagcgcagctgcctacggcgcaggctcgt
ctggtgcagagcaaccaacaactgggccacagctttgccgccgccggcatgaccagcctt
atcgccacactgctgcgcatgacacaagaaagcgcgggcaacgccctggtcgccaacttc
agcgaagatcagagcgccttgctgcaccttactcaaacccacgcccagcgcagcgcgctg
acccaaaggctagaccaggatcttaccacccatgaggggcgtagcctgatcaagcgggtc
accctgggtggacgcggcatcatagaacacatactgactcagccgctgacgcaactgtca
gcgctgcaagacaagttggccgctaccaatggacaagttcagactaaaccgaaaaaagtg
gccaagcttataagctatttaggccaggttaattcgaacacgactcaagcatcacagttt
gccacgccgtcgatgacaggcggtgcaacaggtaacttacccactatgacccagcattca
gctcagctaccaggctcaccgatcagcaacccagatctcagcgcctttcatgacaatcaa
caaaaggcgcgtcaggcccatctcgctttcctcaagagccgtgaatcagggctgaaagtg
gccgacctgctgcttaagcagcaactggcccaagccataggtagcccatcggcgccagct
gcggcctcaagcgtcacccagatgccactcagaccaaggcatgatctggtcgcgccatac
cgcgcgccagttccggcccataagccctgcatctgggactatcacgacctggtggaatac
gccgagggggatatcgccaaggtattcggtcccgactatagcgtgatcgacggctactcg
cgccgggtgcgcctgcccaccacagattatctgctggtatcacgggtcaccaagctggac
gccaaactgggcgaatataagcccagcaccatgaccacggaatacgacattcccgtcggc
gccccctacctggtggacggtcagatcccctgggcggtcgcggtcgaatcgggtcagtgc
gacctcatgctaattagctacctgggcatagacttcgagaacaagggcgagcgagtctat
cgcctgcttgactgtaccctcaccttcttaggggatctgccccgcggtggcgatacccta
aggtatgagattaagatcaacaacttcgcccgaaatggcgataccctgctgttcttcttc
tcctacgaatgtttcgttggcgataccatgatcctcaagatggatggtggctgcgccggt
ttcttcaccgacgccgagctggctgacggtaaaggggtgatccgcaccgaggaagaactg
ctggctcgcagccgcgccgctaagcagacctttaacccactcctggactgtccgcgcacc
caattcagctatggtgacatccacaagttgctgtcggccgatatccaaggctgtttcggt
ccctcacacacaggctctgctcagccttctctctgctttgcgtcggagaagttcttgatg
atcgaagaggtcagcaaggtagaacgaaacggcggcgcctggggccttggcctggtagaa
ggccataagcagctcgagcctaaccactggtatttcccttgccacttcaaggacgatcag
gtgatggccggctcgctgatggccgagggttgtggccagttgctgcagttctacatgctg
caccttggcatgcacacccagacccaaaacggtcgtttccagccgttggaaaatgcctcg
cagaaggtgcgttgtcgcggccaggtgatcccgcaatcggcccgtctcacctaccgcatg
gaggtgaccgagataggctttagcccacgcccttacgccaaggccaatatcgatatcttg
ctaaatggcaaggtggtggtcgacttccacaatctgggggtgatgatcaaagaggaatct
gagtgtacccgctatcctgctcttgaaagcagcgacacaagcagcgcacaggcgaccagc
gctcaaggtgcatcagccaatgcaccgctaatgactaatgccccgctgatggctcagatc
cccgatctcagcgctgcgcctaacaagggggtaattccgctaacgcatgtggaggcgcct
gtgaccccggactaccctaaccgggtaccagatactgtgccttttaccccctatcacctg
ttcgaattcgccaccggcgatatcgaaaagtgcttcggcccagagttcgccatctaccgc
ggcatgatcccgccgcgtaccccctgcggcgatctgcagctcaccacccgggtgatagag
gttaacggccagcgcggcgacttcaagcgccccgccagctgcatcgccgagtatgaggtg
ccaagcgatgcctggtatttcgatgccaacagtcatcaggcgctgatgccctactctgtg
atgatggagattgccctgcagccaaacggcttcatctcgggctatatgggcaccaccctc
ggcttccctggtctcgagctcttcttccgcaacttagacggtagcggcgaactgctgcgt
caggtggatctgcgcggcaagaccatagtcaacgactcacgcctgctctccaccgtgatg
gcgggcaccaatatcatccagagcttcagcttcgagctgaacacagatggcgagcccttc
tatcgtggcacagctgtgtttggttacttcaaggccgaggcgctcaaagaccagctggga
ttagacaatggtaaggtcactcagccttggcatcaggccaaggggatagcaccagatatc
aaggtcaacctactggacaagggcggccgccatttcaacgcgccgacgggccagccccac
taccgcctggcgggcggtcagctgaactttatcgacagcgtcgagatcgtcgataacggc
ggcacccacggcctgggctacctctacgccgagcgcaccatagatccgagcgactggttc
ttccagttccacttccatcaggatcctgtgatgccgggctcattaggcgttgaagccatc
atagaaaccatgcagacttatgccatcagcaaagacttgggcgccgggttcaccaatccg
aaatttggccagatcctctccaacatcaagtggaagtatcgcggtcagatcaacccactg
aacaaacagatgtcgatggatgtgagtatcacctcggtcaaagaggacgcaggcaagctg
gtgatcaccggcaatgccagcctgagtaaggatggcctgcggatctacgaggtgagcgac
atcgccatctgcatcgaagaagcctaa
DBGET
integrated database retrieval system
