Shewanella alkalitolerans: K0J45_13975
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Entry
K0J45_13975 CDS
T09228
Name
(GenBank) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
shns
Shewanella alkalitolerans
Pathway
shns00240
Pyrimidine metabolism
shns01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shns00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
K0J45_13975
Enzymes [BR:
shns01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
K0J45_13975
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
DUF7126
Motif
Other DBs
NCBI-ProteinID:
QYJ96634
LinkDB
All DBs
Position
complement(3196166..3197080)
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AA seq
304 aa
AA seq
DB search
MLAQYLDINPEVKAALEAGRPVVALESTIISHGMPYPQNVETALKVEQIIRDNGAVPATI
AILKGRLKVGMTHDEIEYLGKAGQAVIKTSRRDIPFIVAKQADGATTVASTMILAAMAGI
KVFATGGIGGVHRGAQQTFDISADLQELANTDVAVVCAGAKSILDIGLTLEYLETQGVPV
VGYETETLPAFYTRESDFGVDYRLDTPKQVADAMTAKWQMGLKGGVVVANPIPAEYALDK
AMIDQVIKDAVAEMDTKGISGKASTPFLLAKVAEKTEGSSLAANIQLVFNNAKLAAQIAC
EYSR
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgttagcgcagtacctagatatcaacccagaagtgaaagcggcattggaagccggtcgt
cccgtggtggcactggagtcgaccatcatctctcacggtatgccttacccgcaaaacgtc
gagaccgccctcaaggtggagcagatcattcgtgataacggcgcggttcctgcgaccatc
gccatcctcaagggacgcctcaaggtgggcatgactcacgatgagatcgagtatctgggt
aaggcgggtcaggcggtgatcaagaccagccgtcgcgacattcccttcatcgtggctaag
caggccgatggtgcgaccacggttgcgtcgaccatgattttggcggcgatggcaggcatc
aaggtgtttgcgaccggcggtatcggcggcgtgcatcgcggtgcccagcagactttcgat
atctctgccgacctgcaggagctggctaataccgatgtggccgtggtctgcgctggtgcc
aagtcgattctggatatcggcctgacgctggagtacttagagacccaaggcgtgccggtc
gtcggttatgaaaccgagacgctacctgccttctacacccgtgagagcgacttcggcgtc
gactaccgtctggacacccctaagcaggtggccgatgccatgacggccaagtggcagatg
ggtctcaagggcggcgtggttgtggctaatcctatcccggccgaatatgcccttgataag
gcgatgatcgatcaggtgattaaagatgccgtggccgagatggataccaaggggatctcc
ggcaaggcctcgacgcctttcctgctggccaaggttgccgagaagacagagggcagcagc
ctggcggccaacatccagctagtgtttaacaacgccaagctggcggcgcagatcgcctgt
gaatacagccgttaa
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