Shewanella alkalitolerans: K0J45_15785
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Entry
K0J45_15785 CDS
T09228
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
shns
Shewanella alkalitolerans
Pathway
shns03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shns00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K0J45_15785 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shns03400
]
K0J45_15785 (ung)
Enzymes [BR:
shns01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
K0J45_15785 (ung)
DNA repair and recombination proteins [BR:
shns03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K0J45_15785 (ung)
Prokaryotic type
K0J45_15785 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QYJ96959
LinkDB
All DBs
Position
complement(3614862..3615530)
Genome browser
AA seq
222 aa
AA seq
DB search
MTEISQWQDFIDQEAQQAYFGQLQSFVQGERDAGKAIYPQEEQVFSAFELTPLDKVRVVL
IGQDPYHGEGQAHGLCFSVQPGVKVPPSLVNMYKELASDIDGFAIPAHGYLAKWAEQGVL
MLNTVLTVEQGKAHSHAKAGWETFTDNALRLLNEQQRPIIFVLWGGHAMKKSKLIEAGQH
HLVSGPHPSPLSAYRGFFGCKHFSKINELLKGSGEAPIDWQV
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgacagagatcagccaatggcaagattttatcgaccaggaggcccagcaggcctacttt
ggccagttgcagtctttcgtgcaaggtgagcgcgatgccggtaaggcgatctacccgcaa
gaggagcaggtgtttagtgccttcgagctaacgccgctggataaggtgagggtagtgttg
attggtcaagatccttatcacggcgagggccaggcgcacggtctctgcttctcggtgcag
cccggggtgaaggtgccgccatctttggtgaacatgtataaggagctggccagtgatatc
gatggctttgcgatcccagcccatggctacctggccaagtgggcagagcagggcgtcttg
atgctcaatactgttctcacggtagagcagggcaaggcgcactcccatgccaaggccgga
tgggagacctttaccgacaacgccttgaggctgcttaatgagcaacagcgcccgattatt
ttcgtgctgtggggcggccacgccatgaagaagagcaagcttatcgaggcgggccagcac
catctggtgagcgggcctcacccttcaccgctctctgcctatcgaggtttttttggctgt
aaacacttctcaaaaatcaacgagttgttaaagggctctggcgaggcgcctatcgactgg
caggtataa
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