Shewanella alkalitolerans: K0J45_16015
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Entry
K0J45_16015 CDS
T09228
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
shns
Shewanella alkalitolerans
Pathway
shns00550
Peptidoglycan biosynthesis
shns01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shns00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K0J45_16015 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
shns01003
]
K0J45_16015 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shns01011
]
K0J45_16015 (mrcB)
Enzymes [BR:
shns01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
K0J45_16015 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
K0J45_16015 (mrcB)
Glycosyltransferases [BR:
shns01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
K0J45_16015 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
shns01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
K0J45_16015 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
BLACT_WH
Motif
Other DBs
NCBI-ProteinID:
QYJ97004
LinkDB
All DBs
Position
complement(3674132..3676501)
Genome browser
AA seq
789 aa
AA seq
DB search
MTNKETPTPRRPRKSTNSKAGNSQTPKRKSASKSTATARPGWGRRIWSLSWKLGLILFAA
MTIYSIYLDQIIARKFEGQKWHLPAQVFSRSMALYPGAAVSHDQLIAELKLLGYRKVANP
RQVGEFSASKTKVDLWRRPFLHPQGSQEAQRVMISFDSQGVASVARSSDHRELAVFHLEP
VLLDRMITGDGEDRLFVATDKIPKAIVDALILVEDRSFYEHHGVNPFAIIRAAMVNISAG
RTVQGGSTLTQQLAKNFFLSSERSIIRKLREALMAIIIDFRYDKDEILEAYLNEVYMGQD
KSRAVHGMGLASQFYFGRPIAELTLPQQAFLVAAIKGPSYYNPWRFPERAQERRDLVLRL
LMESGQLPVAQYKAAVESPLGVRKASKPVHQKLPAFFAVVRGELSRRFGDSLLQQSGIKV
YTTLDPLAQEAAEQAVRSTMKNLEQRDKALQVGMVVTDKYSAGIAAMVGDKVPSYQGFNR
AVEIRRPIGSLIKPFVYATALTHGDKYTLATPLKDEPITLTNSQGKTWSPQNVNKQFSGE
VPLMTAFKKSMNVPTVNLGMAIGTDAVATTLAKSGWDETIPEYPSMLLGAVNGSPLMVAQ
VYQTLADNGRYRQLSAVTHVLDADNQPLSASQRGADQAISVASDFLVQHAMTQVVQSGTA
TKLGQAFPGVTLAGKTGTSNDSRDSWFAGFDERNVAAVWVGLDDNGKTSLYGSSGAMAVY
QAFLKQRAPISLRRTPVNGVVSGYFDAKTGVAKQGNCGNVVAVPALAESYHPAKNCGEPL
SWWQKLMGG
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgacgaataaagagacgccaacaccacgcagaccgcgcaagtcgactaatagcaaggcg
ggcaatagccaaacgcctaagcgcaagtcggcgagcaagagtaccgcgacagcgcggccg
ggttggggccgtaggatctggtctttgagctggaagctcggccttatcctgtttgctgcc
atgaccatctacagtatctatctggatcagatcatcgcccgcaagtttgaggggcagaag
tggcacctgccggcgcaggtatttagccgttccatggccctctatcccggtgcggctgtg
agtcacgatcagctgatcgccgagcttaagctgctgggttatcgcaaggtggccaatccc
cgtcaggtgggcgaattttccgcctccaagaccaaggtggatctctggcgccgtcccttc
ctccatcctcagggatcccaggaagcccagcgggtgatgatcagcttcgacagccagggg
gttgcctcggtggctcgcagcagtgaccatcgcgagctggcggtgttccacctggagccc
gtgctgctggatcgtatgatcacaggcgatggcgaagacaggctgttcgtggccacagac
aagatccccaaggcgatcgtcgatgcgctgatcctggtggaagacaggagcttctatgaa
catcacggcgtgaatccctttgccatcatacgtgccgccatggtcaacatcagcgccggg
cgcacggtacaaggtggctcgaccctgactcagcagctggcgaaaaacttcttcctctcc
agcgagcgctctatcatacgtaagctcagggaagccctgatggcgatcattatcgatttt
cgctacgacaaggatgagatcctcgaggcctacctcaacgaggtctacatgggtcaggac
aagtcccgcgccgtgcacggcatggggctggcgtctcagttctatttcggcagaccgatt
gccgagctgaccttgccgcagcaggccttcctggtggcggcgatcaaggggccttcctac
tacaacccctggcgtttccccgagcgggctcaggagcgtcgggatctggtgctacgtctc
ttgatggagtcgggccagctgccggtggcacaatacaaggcggcggtcgaatcccccctt
ggggtgcgtaaggcgagcaagcctgtgcatcagaagctgccggccttcttcgccgtggtg
cgcggcgagctgtcgcgtcgattcggcgacagcctgcttcagcagtcgggtatcaaggtc
tacaccaccttagatcccctagcccaggaggcggcggagcaggcggtgcgctcgaccatg
aaaaacctggagcagcgtgacaaggcgcttcaggtgggcatggtggtgaccgacaagtat
tcggcgggtattgccgccatggtgggcgacaaggtgccaagctatcagggctttaaccgt
gcggtggagatccgtcgtcctatcggctcgcttatcaagccattcgtctacgctacggcg
ctgacccacggcgacaagtacaccctggcgacgccgctgaaggatgagccgatcaccctg
accaactcccagggcaagacctggtcgccgcagaacgtcaacaagcagttctccggcgag
gtgccgctgatgaccgccttcaagaagtcgatgaacgtgccgacggtgaacctcggcatg
gcgataggcacagacgcggtggcgaccacactggccaagtcgggctgggacgagaccatc
ccagagtatccgtccatgttgctgggggccgttaatggctcaccgctgatggtggcgcag
gtgtatcagaccctggcagacaatggccgctaccgtcagctgagtgcggtgacccatgtg
ttggacgccgataatcagccgctgtcggccagtcagcgcggcgcggatcaggcgatctct
gtggccagcgatttcctggtgcaacacgccatgactcaggtggtgcagtcgggcacggca
actaagctgggccaggccttcccgggcgtgaccctggcgggcaagacgggcaccagtaac
gattcccgcgactcctggtttgccgggtttgatgagcgtaacgtggccgccgtctgggtg
ggcctggacgataatggcaagaccagcctctatggcagcagcggcgctatggccgtctac
caggccttcctcaagcagcgcgcgcctatcagcctgagacgcacgccggtcaatggcgtg
gtgtctggctatttcgatgccaagacgggtgtcgccaagcagggcaactgcggcaacgtg
gtggccgttcctgccctggctgagagctatcatccggccaagaactgcggcgagccgctc
tcctggtggcagaagctgatgggcggttaa
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