Shewanella alkalitolerans: K0J45_16410
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Entry
K0J45_16410 CDS
T09228
Name
(GenBank) PAS domain S-box protein
Organism
shns
Shewanella alkalitolerans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
PAS_9
PAS_3
MCP-like_PDC_1
HATPase_c
PAS
HisKA
PAS_4
PAS_8
dCache_1
Hpt
Diguanyl_cycl_sensor
PDE8A_N
PAS_7
Motif
Other DBs
NCBI-ProteinID:
QYJ99709
LinkDB
All DBs
Position
complement(3781149..3786455)
Genome browser
AA seq
1768 aa
AA seq
DB search
MDMSRLRTFRSRIIVQIALPLIAIMAMVLSLIAWFNYRAEESYLYGDLEKQAEMVASRVH
HFLSFAEKDTRTFADLLGQMSRDQLLEQDGELKALLTRRLERQSDFYASAIAFRPSLTPN
QQPYAPYVYRDQDGVKFLDIGADSYDYTDGQWAWWSEAIDKPQGYWSLPYFDEGAGNILM
ITFSQPFGPSSPYWGVVTVDLALDALPAMAGIDADRMLVLDDKGRLIYHKDAQLLMSQGT
DKWLAASNDNGDFVTLLQSAKSGNSRMLAADGQAYLASVGVVPKLNWRVVIMTQEDKLSH
QLYMGLSSLVLTLLLISAVLYLTGYLTARRLSLPIERLAAGIVAFGAGKTKHIEGTRGAV
TEVETLTDKFNELAEVLAQREQALLDSRGNRFAKLIDGMSDKSFYCSLEPDGQIAQVSAG
VEKVLGVSPDLLKRKYQRMFSDNPINEANWEYMDSALQGNSVPPHQVEMIAANGSVRRLD
LFMQPLLADNGELLSIEMLFNDVTEQFSAAAWSNAVLESAPEAMLIVDEQGQVVFSNSRC
QQLFGYDAQQMLALNVDQLVPDSVKHHEALRAKYIGEGVDRRMGLGLGKTLKAKKADGSL
FPVEISLGLLPADSDGLRQVAASIRDMTEELATAKRIKDSESRFRGLVGNIPGAVYRTRL
GEQWVMEYVSDNIAEITGYPAADFIENKKRVFASLILEADRVATDTAINKGIAEQQSFEV
QYRIHHRDGSLRWVHEKGKASYDDEGNALWFDGSIQDVTQSKLAQEKIAQSQQQLETITE
SIPNTVYQLRWIANDQRYFTFLSRACITTLGFHRDQLLANFDLVADCIIESERARIIRAL
SGESASGLKWIEEFRYQHPTGEQRWLQAGARGDRQDDGSIIWNGYLMDISERKQMDRELA
KREAHFRALFDNAGIGIVNVDDRGVILDCNEQFSQYLQLPIERLKGSLFFDYQDPEQGLE
AKNSFKHLMSDGADSVKLEIRLLNQAGEARWMDVNMTGLSDKQGEYRSAVLSMADISSLK
LLSEELTQAKDVADAASKAKSDFLANMSHEIRTPMNAIIGMSQLCLQTSLDKKQQNYVEK
IDRASKSLLGIINDILDFSKIEAGKLDIEAVPFQLDTMLEDLSDMFSVKAADKQLELLFA
VAPNIPRHLVGDPLRLSQVLINLMNNAIKFTEQGEVMLSISQLVREDEEILLKFSVRDNG
IGLTEEQRGKLFQSFSQADSSTTRKYGGTGLGLAICKQLVELMGGEIGVESQFGNGSTFF
FSVRFKVADNQLIKVAHELEGMRILVADDNATARDILRSTLESMGFTVDTVRSGAEALSR
CQETDYGVALIDWRMPEMDGLETARRLLSERANPPKTLIVSAHADGDFIDKAEQAGISGY
ITKPISASRLLDGIMSALGKQGAMPVRRKGSEVSPALLAQLKGKRILLVEDNEMNQEVAS
EFLEQVGVILSIAENGQVALEKLAMQSFDLVLMDCQMPVMDGYQATAELRKRPELADLPV
IAMTANAMAGDKEMCLRAGMNDHIAKPIEVSLLYKTLLEYLGDDSQVIEETSAEQIHQHS
QDAYWPQHPALDIDKGLQLVQNSARLYRRIFERFYTGQSRCAELIATAQREGKQEEAVRY
AHTLKGVAGNLCCPELVTLAKQVEQALSDSIQADVTEALTQMGELLDSLCTTIGYWLSQT
GAETLPQEDGADPGAAADAPAMSAQELDAAIKELLKMLEEADAEAVEKLQAIRDRLPKSL
ANKIAPVLNMVNAYQFDEAIELVEEIFS
NT seq
5307 nt
NT seq
+upstream
nt +downstream
nt
atggacatgagcagacttcgtacctttcgtagccggataatcgtacagattgccttaccc
cttatcgccatcatggccatggtgttgagcctgatcgcctggtttaactaccgggccgaa
gagagctacctctatggcgatctcgagaagcaggccgagatggtggccagccgggtgcat
cattttctctccttcgccgagaaggatacccgtacctttgccgatctcttaggccagatg
agtcgcgatcagctgctcgagcaagatggtgagctcaaggcattgctgacccggcgcctg
gagcgccaaagcgacttctatgccagcgccatcgcctttcgccccagcctgacacctaat
caacagccctatgccccctatgtctaccgggatcaggacggggtgaagttcttggatatc
ggcgccgacagctacgactacaccgatggccaatgggcctggtggagcgaggcgatagac
aagcctcagggttactggtcgctgccctatttcgatgagggtgccggcaacatcttgatg
atcaccttctcccagcccttcggcccttcgagtccctactggggggtggtgacagtggat
ctggccctggacgccctgccagccatggcggggatcgatgccgatcgcatgctggtgttg
gatgacaagggccgacttatctaccacaaggatgcgcagctgctgatgtcccagggcaca
gataagtggctcgccgcatcaaatgacaacggcgacttcgtcaccctgctccagtcggcc
aaatccggtaacagccgcatgctggccgccgacggtcaggcctatcttgccagcgtaggc
gtggtgcctaagctaaactggcgggtggtgatcatgacccaggaggacaagctctcccac
cagctctacatggggctctcctctctggtgctgaccctgctgctgatctccgccgtgctc
tatctgacgggatatctcaccgccagacgcctgtcactgcccatcgagcgcctggccgcc
ggcatagtggccttcggcgccggtaagaccaaacatatcgaaggcacccggggcgcggtg
accgaggtggagaccctaacggacaagtttaacgagctggccgaggtgctggcccagcgc
gagcaagcgctgctggattcacgcggtaaccgtttcgccaagctgatcgatggcatgagt
gacaagtccttctactgctcgctggagcccgatggtcagatcgcccaggtttctgccggg
gtcgagaaggtgctgggggtcagcccggatctgctcaagcgtaagtatcagcggatgttt
tccgacaaccccatcaacgaggcgaactgggagtacatggacagtgccttgcagggtaat
agtgtaccgccccatcaggtggagatgatcgccgccaacggcagcgtgcgccgcctggat
ctcttcatgcagccgctgctggcggacaacggcgagctgctctccatcgagatgctgttt
aacgatgtgaccgaacagttctcggcggcggcctggtctaacgccgtgctggaatcggcc
cccgaggctatgttgatcgtcgacgagcagggccaagtcgtcttcagtaacagccgctgc
caacagctgtttggctatgatgcccagcagatgctagcgctgaatgtcgaccagctggtg
cccgatagcgttaagcatcatgaggccttaagagccaagtatatcggcgaaggggtggat
cgtcgcatgggccttgggctgggtaagaccctcaaggccaagaaggccgacggcagcctg
tttccggtggagatcagcctggggctgctacccgccgacagcgacggcctgcgccaggtg
gcggcctcgatacgggacatgacagaagagctggccaccgccaagcggatcaaggacagc
gagagtcgtttccgtggcctggtgggcaacattcccggcgccgtctaccgcacccgcttg
ggcgagcagtgggtgatggagtatgtcagcgacaacatcgccgagatcaccggctatccc
gccgccgactttatcgagaacaagaagcgggtctttgccagcctgatcctggaggcggac
agggtagccaccgacacggcgatcaacaaggggatcgccgagcagcagagcttcgaggtg
caatatcgtattcatcaccgggatggcagcctgcgctgggtgcacgagaagggcaaggcc
agctatgacgatgaaggcaatgccctctggttcgatggcagtatacaggatgtcacccag
agcaagctggcccaggagaagattgcccagtcccagcagcagctggagacgatcactgag
tcgatccccaacaccgtctatcagctgcgttggatagccaacgatcagcgctacttcacc
ttcctctcccgcgcctgcatcaccaccctgggttttcaccgggatcagctgctggcgaac
ttcgacctggtggccgattgcatcatagagtcggagcgggcccgcatcattcgcgccctc
tccggcgagagcgcctctgggctcaagtggatcgaagagtttcgctaccaacaccccacc
ggcgagcagcgctggctacaggcgggggccaggggcgatcgtcaggacgatggcagcata
atctggaacggttacctgatggatatcagcgagcgcaagcagatggacagggagctggcc
aagcgcgaggcgcacttcagggccctgttcgataacgccggtatcggcatagtcaatgtc
gacgatcgcggcgtcatcttagattgcaacgagcagttcagccaatacctgcagctgccg
atcgagcgtctcaagggcagtctcttcttcgattatcaggaccctgagcaggggctcgag
gccaagaacagcttcaaacacctgatgagcgacggcgccgacagcgtcaagttggagatc
cgcttgctcaaccaagctggcgaggccaggtggatggacgtcaacatgaccggcctatcc
gacaagcagggggaatatcgctccgccgtgctctccatggcggatatcagttccctcaag
ctgctctccgaggagctgacccaggccaaggatgtggccgacgccgccagcaaggccaag
agcgacttcctggcgaacatgtcccacgagatccgcaccccgatgaacgccattatcggc
atgtcacagctgtgtctacagaccagtttggacaagaaacagcagaactatgtggagaag
atagaccgcgcctccaagtcgctgctggggatcatcaatgacatcctggacttctccaag
atagaggcgggcaagctggatatcgaggcagtgcctttccagctcgatactatgctggaa
gatctcagcgacatgttttcggtcaaggccgccgacaagcagctcgagttgctgtttgcc
gtggcgcccaatattccccgccatctggtgggggatccgctgcgactcagccaggtgttg
atcaatttgatgaacaacgccatcaagtttaccgagcagggcgaggtgatgctgtcgatc
agtcagctggtgcgtgaggatgaggagatactactcaagttcagcgtgcgcgataacggc
ataggcctcaccgaggagcagcgcggcaagctgttccaatctttcagtcaggccgacagt
tccaccacccgcaagtatggcggcacaggtctggggctggcgatctgcaagcagctggtg
gaactcatgggcggcgagatcggcgtcgagagtcagttcggcaacggcagcaccttcttc
ttcagcgtgcgcttcaaggtcgccgacaatcagttgatcaaggtggcccacgagctggaa
gggatgcggattctggtcgccgacgacaacgccaccgcccgggatattctgcgcagcact
ctcgaaagcatgggctttaccgtcgatacggtgcgcagcggcgccgaggcgctgagtcgc
tgtcaggagaccgactatggggtggcgctgatcgattggcgcatgcctgagatggacggc
ctggagacggcgcggcgactgctgagcgagcgcgctaacccgcccaagacgctgatcgtc
tcggcccatgccgacggtgattttatcgacaaggcggagcaggcggggatctcgggctat
atcactaagccgatcagcgcctcacgcctgctggacggcatcatgtcggccctgggtaag
caaggtgccatgccggtgcggcgcaagggcagcgaggtaagtcccgccctgctggcgcag
ctcaagggcaagcgcatcctgctggtggaagacaacgagatgaaccaggaggtggccagc
gagttcctcgagcaggtgggagtgatcctctcgattgccgagaatggtcaggtggcgctg
gagaagctggccatgcagagcttcgacttggtgctgatggattgtcagatgccggtaatg
gatggctatcaggccaccgccgagctgcgtaagcgtcccgagttggcagacttgcctgtg
atcgccatgacggccaacgccatggccggggataaggagatgtgcctgcgcgccggcatg
aacgatcatatcgccaagcctattgaggtgtcgctgctctacaagacgctgctggaatac
ctgggggatgacagccaggtgattgaggagaccagcgctgagcagatccatcagcacagc
caggatgcctattggccacaacatccggcgctggacatcgataaggggctgcagctggtg
cagaactcggcgcgcctctaccggcggatattcgagcgtttctatacgggtcagtcccgc
tgcgccgagcttatcgccaccgcccagcgtgagggcaagcaggaggaggcagtgcgttat
gcccacaccctcaagggggtggccggtaacctctgctgcccagagctggtgaccctggcc
aagcaggtggagcaggcactcagcgattcgatccaggccgatgtgactgaggcgctgact
cagatgggtgagctgttagacagcctgtgcaccaccataggctactggctcagtcagacc
ggggccgagacgctgccgcaagaagatggcgccgaccccggggcggctgccgatgcgcca
gccatgtcggcccaggagctggacgccgccatcaaggagctgctcaagatgctggaggag
gcggacgccgaggcggtggagaagctacaggcgatccgcgatcgtctacctaagtcactg
gctaataagatcgcgcccgtgctcaacatggtgaacgcctatcaatttgacgaggcgatc
gagctggtggaggagatctttagctag
DBGET
integrated database retrieval system
