Shewanella alkalitolerans: K0J45_18935
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Entry
K0J45_18935 CDS
T09228
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
shns
Shewanella alkalitolerans
Pathway
shns00541
Biosynthesis of various nucleotide sugars
shns01100
Metabolic pathways
shns01250
Biosynthesis of nucleotide sugars
Module
shns_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
shns00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
K0J45_18935 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
shns01005
]
K0J45_18935 (rfaD)
Enzymes [BR:
shns01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
K0J45_18935 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
shns01005
]
Core region
K0J45_18935 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
QYJ97544
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Position
4352995..4353948
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AA seq
317 aa
AA seq
DB search
MIIVTGAAGFIGSNIVKALNNLGRTDIIAVDDLTDGTKMFNLADCEIADYLDKADFIEQI
VQGQFDGKVEVIFHQGACSSTTEWDGKFMMANNYEYSKTLLHFCERNGSQFIYASSASVY
GGSDKFIEQRELEKPLNVYAYSKFLFDQYVRQHSFTTQVAGLRYFNVYGPREQHKGGMAS
VAFHFNNQIKASGICRLFQGHDGFEDGKQLRDFVYVEDVVKVNLWLWQNPGISGVYNCGT
GQAQSFNDVANAVIAYHGKGDIEYIPFPDKLKGAYQSYTQADLTQLRAAGYTQAFKTVEQ
GVPEYLDWLAAQHFIGQ
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgataatagtcacaggtgcagcaggcttcatcggtagcaacatagttaaagcgctcaat
aacttaggacgcacagatattatcgccgtagacgacctgaccgacggcaccaagatgttt
aacctggccgactgtgaaattgccgactatctggataaagccgacttcatcgagcaaatc
gtccagggtcagttcgatggcaaggtcgaagtgatcttccatcagggtgcctgctcgtcg
accacagagtgggacggcaagttcatgatggccaacaactacgagtattccaagacactg
ctccacttctgcgagcgtaacggcagccagtttatctacgcctcatcggcttctgtctat
ggcggcagcgataagtttatcgagcagcgggaactggagaagcctctcaacgtctacgcc
tactccaagttcctgttcgaccaatatgtcagacagcacagcttcaccactcaggtagct
ggcctacgttacttcaacgtctatgggcctagggagcaacacaagggcggcatggccagc
gtggccttccacttcaacaaccagatcaaggcgagcggcatctgtcgcctgttccaaggc
cacgacggcttcgaagatggcaagcagctgagagacttcgtctacgtggaagatgtggtc
aaggtcaacctctggctttggcaaaacccagggatctcaggagtatacaactgtggtacg
ggtcaggcacagagcttcaacgacgtggccaatgcagtgatcgcctatcatggtaaggga
gacattgaatatattcccttcccggataagctaaagggcgcctatcagagctatacccag
gccgacctcacgcagcttagagccgccggatatacccaggcctttaagacagtcgagcaa
ggagtcccagaatatctggactggctggctgcacagcacttcatcggtcagtaa
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