Shewanella alkalitolerans: K0J45_19030
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Entry
K0J45_19030 CDS
T09228
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
shns
Shewanella alkalitolerans
Pathway
shns03030
DNA replication
shns03410
Base excision repair
shns03420
Nucleotide excision repair
shns03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shns00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K0J45_19030 (polA)
03410 Base excision repair
K0J45_19030 (polA)
03420 Nucleotide excision repair
K0J45_19030 (polA)
03440 Homologous recombination
K0J45_19030 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shns03032
]
K0J45_19030 (polA)
03400 DNA repair and recombination proteins [BR:
shns03400
]
K0J45_19030 (polA)
Enzymes [BR:
shns01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K0J45_19030 (polA)
DNA replication proteins [BR:
shns03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
K0J45_19030 (polA)
DNA repair and recombination proteins [BR:
shns03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
K0J45_19030 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K0J45_19030 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QYJ97562
LinkDB
All DBs
Position
4372019..4374769
Genome browser
AA seq
916 aa
AA seq
DB search
MPNIAENPLILVDGSSYLYRAYYAPPHLTNSKGEATGAVYGVINMLRSLLNQYKPTQMAV
VFDAKGKTFRNEMYAEYKAHRPPMPDDLRTQIEPLHRIIRALGLPLVCIPGVEADDVIGT
IARQASQEGRAVLISTGDKDMAQLVDDKITLINTMTNTILGPDEVSEKFGVGPELIIDLL
ALQGDKADNIPGLPGVGEKTALAMLQGVGGVDAILANPEKMPELGFRGAKTMPAKIAEHG
DMLKLSYELATIKCDVELEQDWHQLNIQDADRDELIKCYGEMEFKRWLAEVLDNKSSASS
QEEADEVPAPQAIDTQYDTILTWEALDEWLKALAAAPLFALDTETTSLNYMEAKLVGLSF
AIEPGKAAYLPLAHDYADAPEQLDSEQVLAKLKPLLEDPSLLKVGQNLKYDMSILANVGI
ALKGVAFDTMLESYVFNSVASKHNMDDLALKYLGHKNISFEEIAGKGVKQLTFNQIPLET
AAPYAAEDADITLRLHQHLWPRLQKASELASVFTDIELPLVSILSQIERQGVLIDSMLLG
QQSDELARKIDELEQKAYEIAEEPFNLGSTKQLQALFFEKLGYPVLKKTPKGAPSTAEEV
LVELALDYPLPKIILEHRSLSKLKSTYTDKLPLMVDGKTGRVHTSYHQAIAATGRLSSSE
PNLQNIPIRTEEGRRIRHAFVAPEGRKILAADYSQIELRIMAHLSQDKGLLSAFAEGKDI
HRATAAEVFDVDFSEVTSEQRRRAKAVNFGLIYGMSAFGLARQLDIPRHEAQQYIDIYFK
RYPGVLKYMEDTRAAAAEQGYVSTLYGRRLYLPAIKDRNAMRRQAAERAAINAPMQGTAA
DIIKKAMINIAQWIETETQGEITMIMQVHDELVFEVDADKADSLKLKVCELMAQAASLDV
ELLAEAGIGDNWEQAH
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgcctaatatcgctgaaaacccactcattcttgtggatggttcttcctatctttaccgc
gcctactatgcgccgcctcacctgactaactccaagggtgaagccacgggggccgtgtat
ggcgtgatcaacatgctacgcagcctgcttaaccaatataagccgacccagatggcggtg
gtgttcgatgccaagggaaaaaccttccgcaatgagatgtatgccgaatataaggcccac
agaccccccatgccggacgatctcaggacgcagatcgagccgctgcatcgcatcattcgc
gcattggggcttcccctggtctgtattcccggcgtcgaggccgatgatgtcataggtacc
atcgccagacaggccagccaggaaggccgcgccgtgctgatcagcacaggcgataaagat
atggcgcagttggtggatgacaagatcaccctgatcaacaccatgaccaataccatccta
ggccccgatgaggtgagcgagaagtttggtgtcggccctgagctgatcatcgacctactg
gcactgcaaggcgataaggcagataacattcccggcctgccaggcgttggtgagaagacg
gcgctggcgatgctacaaggcgtcggcggtgtcgacgccatcctcgccaacccagagaag
atgccggaactcggctttaggggtgctaagaccatgcccgcaaagatcgccgaacatggc
gacatgctcaagctctcctatgagctggcgaccatcaagtgcgacgtcgaactggaacaa
gactggcaccagctcaacattcaagacgcggatcgcgacgagctgatcaaatgctacggc
gagatggaattcaaacgctggctggccgaggtgttagacaacaagtcgagtgccagcagc
caagaagaggccgacgaagtgccggcgcctcaggctatcgatacccagtacgataccatt
ctgacctgggaagccttagatgaatggctaaaggccctggccgccgcgccgctgtttgcc
ctggatacagaaaccaccagcctcaactacatggaggccaaactggtggggctctcgttt
gccatcgaaccaggcaaggccgcctacctgccgctggcacacgattatgccgatgcccca
gagcagctcgacagcgagcaggtactagccaagctcaagccactgctggaagatcctagc
cttctcaaggtcgggcaaaacctcaagtatgacatgagcatactggccaacgtcggcatc
gccctcaagggcgtggccttcgataccatgctcgagtcctatgtgtttaactcggtcgcc
tccaagcacaacatggatgacctggcgctgaaatacctgggtcataagaatatcagcttc
gaagagatcgccggcaagggcgttaagcagctgaccttcaaccagatcccgctggagacg
gcagcaccttacgccgccgaagacgccgatatcacactcaggctgcatcagcatctctgg
ccgagactgcaaaaggccagcgaacttgccagcgtctttaccgacatagaactgcctctg
gtcagcatactgtctcagattgaacgtcagggcgtgttgatcgacagcatgctgcttggt
cagcagagcgacgaattggcacgcaagatagatgagctggaacagaaggcctacgagatt
gctgaagagccctttaacctgggctcgaccaaacagctgcaggccctcttcttcgagaag
ctgggttaccctgtattgaagaagacccctaaaggcgcaccgtccaccgccgaagaggta
ctggtcgagctggcactggactatccgctgcccaagatcatcctggagcacaggagcctg
tctaagcttaagagcacctacacagacaagttgccgctcatggtcgatggtaagacaggc
cgggtacataccagctaccaccaggccatcgccgccacgggtcgcctgtcatccagcgag
cctaacctgcagaatatccccatccgcaccgaggagggccgccgtattcgtcacgccttc
gtggcgccagagggacgcaagatcctcgcagccgactattcgcagatcgagctgaggatc
atggcccacctctcccaggataaaggcctgctgagcgccttcgccgagggcaaggatatt
cacagagctaccgccgccgaggtgttcgacgtcgacttcagcgaagtcaccagcgaacag
cgtcgccgcgccaaggcagtgaatttcggtctcatctatggcatgtcggccttcggtctg
gcccgccagctggatattccgcgtcacgaggcccagcaatatatcgacatctacttcaaa
cgctatcctggcgtgctcaagtatatggaagatacccgcgctgccgccgccgagcaggga
tacgtatcgaccctctatggtcgcagactctacctgccggctatcaaggatagaaacgcc
atgcgccgtcaggccgccgagcgcgccgcgatcaacgcgccgatgcagggcacggctgcc
gacattatcaagaaggccatgatcaatatcgcccagtggatcgagacagagacccaggga
gagatcaccatgatcatgcaggtacacgatgaactcgtatttgaggtcgacgccgacaag
gccgattcgctcaaactcaaggtgtgcgagctgatggcgcaggccgcctccttagatgtc
gagttactagccgaggctggcattggcgataactgggaacaggcgcactag
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