Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_1857
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Entry
SHJGH_1857 CDS
T02531
Name
(GenBank) RNA polymerase secondary sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sho
Streptomyces hygroscopicus subsp. jinggangensis TL01
Brite
KEGG Orthology (KO) [BR:
sho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sho03021
]
SHJGH_1857
Transcription machinery [BR:
sho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SHJGH_1857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_23
DUF7343
HTH_3
MarR_2
HTH_31
Sigma70_ECF
HTH_37
GerE
HTH_Crp_2
HTH_28
MarR
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AGF61523
LinkDB
All DBs
Position
2241793..2242599
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AA seq
268 aa
AA seq
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MRAMRVTGSTKPHPHDDAPDTSAAFERLAGLPDGPERQALRDELVRLWLPMAERIAVRFR
GRGEALEDLYQVAALGLVKAVDHYDPDRGRAFEAYAVPTITGEIKRHFRDHMWTLHVPRR
VQDLRNRVRAATKELAQTTPGRAPTVAEIAAFTRLSEDEVRTGTEALECFSALSLDAEVA
GTDGYALGDSLGGPDPGFDLVVDRAAVKPCLEALPERERTILYLRFFGGMTQSRIAQQLG
ISQMHVSRLLSGCFDRLRDELLAEVRAP
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgcgatgcgtgtcactggcagcacgaaaccccatccacacgacgacgccccggac
accagcgccgctttcgagcggctcgccgggctgcccgacggtcccgaacgccaagcgctg
cgggacgagctcgtccggttgtggctgcccatggccgagcggatcgccgtacggttccgc
ggccggggcgaggccctggaggacctgtaccaggtggccgcgctgggcctggtcaaggcc
gtcgaccactacgatcccgaccgcggccgggccttcgaggcctacgcggtgcccaccatc
accggggagatcaagcgccacttccgcgaccacatgtggaccctgcatgtgccgcgccgg
gtgcaggacctgcgcaaccgggtccgtgccgccaccaaggagctggcgcagacgacgccg
ggccgggcgcccaccgtcgccgagatcgccgcgttcacgcggctgagcgaggacgaggtg
cgcaccgggacggaggcgctggagtgcttctccgcgctgtccctggacgcggaggtggcc
ggcacggacggatacgcgctgggcgactccctgggcggcccggacccggggttcgacctc
gtcgtggaccgggcggcggtcaagccgtgtctggaggcgctgcccgagcgggaacgcacc
atcctctacctgcggttcttcggcggtatgacgcagagccggatcgcccagcagctcggt
atctcgcagatgcacgtctcgcggctgctcagcggctgcttcgaccggctgcgcgacgaa
ctgctcgcggaggtccgagccccctga
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