Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_1927
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Entry
SHJGH_1927 CDS
T02531
Name
(GenBank) putative RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sho
Streptomyces hygroscopicus subsp. jinggangensis TL01
Brite
KEGG Orthology (KO) [BR:
sho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sho03021
]
SHJGH_1927
Transcription machinery [BR:
sho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SHJGH_1927
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
KORA
HTH_23
HTH_38
HTH_Crp_2
MarR
HTH_27
GerE
Sigma70_ECF
MarR_2
IF2_N
Motif
Other DBs
NCBI-ProteinID:
AGF61593
LinkDB
All DBs
Position
2318709..2319599
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AA seq
296 aa
AA seq
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MNTAAGIRSEAEVVEQTEQDRTCEDSLPGITDPASVAPRDARELSRQFFRRLTELEEGTH
EYQYARNTLIEMNMSLVRFAAGRFRGRGDDMEDIVQTGMIGLIKAIDRFELAREVEFTSF
ALPYIVGEIKRFFRDTTWAVHVPRRLQELRVELAKAREELSSRLDRDPTVAELATLMNLS
EKEVVEAQLASNGYNSASLDAALTGDGPEDGEAVLADFIGVEEEGLRLVEDFHALAPLMA
ELSDRDRQIIHMRFVEEATQAEIGERLGCSQMHVSRLIKRIITRLRQGMLGELGCA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccgccgccgggatccggtcggaagcagaggtcgtcgaacagaccgagcaggac
aggacctgcgaggattcactgcctggcatcacggaccccgcgtccgtcgccccgcgggac
gcacgggagctctcccgccagttcttccgccggctgaccgagctggaggaggggacgcac
gagtaccagtacgcgcgcaacacgctcatcgagatgaacatgtcgctggtgcggttcgcg
gccggacggttccggggccgtggcgacgacatggaggacatcgtccagaccggcatgatc
ggcctgatcaaggccatcgaccggttcgaactggcacgcgaggtcgagttcacctccttc
gcgctgccgtacatcgtcggtgagatcaagcggttcttccgggacaccacctgggccgtc
cacgtgccgcgccggctccaggagctgcgggtggagctggccaaggcacgggaggagctg
tccagccgcctggaccgggacccgacggtcgccgagctggccacgctcatgaacctctcc
gagaaggaggtggtcgaggcccagctcgcctccaacggctacaactccgcctccctggac
gccgcgctcaccggagacggccccgaggacggcgaggccgtgctcgccgacttcatcggt
gtggaggaggaggggctgcggctcgtcgaggacttccacgcgctggccccgctcatggcg
gagctgagcgaccgcgaccggcagatcatccacatgcggttcgtggaggaggccacccag
gcggagatcggggagcggctgggatgctcccagatgcacgtctcccggctgatcaagcgg
atcatcacccggctgcgccaggggatgctgggcgaactcggctgcgcctga
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