Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_2488
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Entry
SHJGH_2488 CDS
T02531
Name
(GenBank) putative exonuclease
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sho
Streptomyces hygroscopicus subsp. jinggangensis TL01
Brite
KEGG Orthology (KO) [BR:
sho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sho03400
]
SHJGH_2488
DNA repair and recombination proteins [BR:
sho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SHJGH_2488
Archaeal homologous recombinant proteins
SHJGH_2488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Metallophos_3
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
AGF62154
LinkDB
All DBs
Position
complement(2928454..2929617)
Genome browser
AA seq
387 aa
AA seq
DB search
MRVLHTSDWHLGRAFHRVNLLGAQAEFIGHLVATVREREVDAVVVSGDVYDRAVPPLAAI
ELFDTALHRLADLGVPTVMISGNHDSARRLGVGAGLIDRAGIHLRTEPSAAGTPVVLRDA
HGDVAFYGLPYLEPALVKDEFGVDKAGHEAVLGAAMDRVRADLATRARGTRSVVLAHAFV
TGGQASDSERDITVGGVAAVPAGVFDGVDYVALGHLHGCQTITERVRYSGSPLAYSFSEA
DHRKSMWLIDLDADGSVTAERVDCPVPRPLARISGALDDLLADPELTRHEDAWIEATLTD
PVRPADPMARLTERFPHTLSLVFAPERPPDDPQVSYARRLAGRTDQQIAQDFVAHVRGAG
PDEHEATVLREAFDAVRADDAVREVAR
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgagagtcctgcacacgtccgactggcacctcggccgggccttccaccgggtgaacctg
ctcggggcccaggccgagttcatcggtcacctcgtcgccaccgtgcgtgagcgcgaggtg
gacgcggtggtcgtgtcgggcgacgtgtacgaccgcgcggtgcccccgctcgccgcgatc
gagctgttcgacaccgccctgcaccgcctcgcggacctcggcgtgcccacggtgatgatc
tccggcaaccacgactcggcccgccgcctcggcgtcggcgcagggctcatcgaccgcgcg
ggcatccacctgcgcaccgagccgtccgccgccggcaccccggtcgtgctcagggacgcc
cacggggacgtcgccttctacggcctgccgtacctggaaccggccctggtcaaggacgag
ttcggcgtcgacaaggccggccacgaggccgtgctgggcgccgccatggaccgcgtccgc
gccgacctcgccacccgcgcgcggggcacgcgttccgtcgtcctcgcccacgccttcgtc
accggcggccaggccagcgacagcgagcgggacatcacggtcggcggggtggccgccgta
ccggccggcgtcttcgacggcgtcgactacgtggcgctcgggcatctgcacggctgccag
accatcaccgagcgcgtgcgctactccggctcgccgctcgcctactccttctccgaggcc
gaccaccgcaagagcatgtggctgatcgacctggacgcggacggctccgtcaccgccgaa
cgcgtcgactgcccggtgccccgcccgctcgcccgcatcagcggcgccctggacgacctc
ctcgccgacccggagctgacccgccacgaggacgcctggatcgaggccaccctcaccgac
cccgtccgcccggccgaccccatggcccggctcaccgagcgcttcccgcacaccctcagc
ctggtcttcgcccccgagcgccccccggacgacccccaggtgtcgtacgcccgccgcctc
gccggccgcaccgaccagcagatcgcccaggacttcgtcgcccatgtgcgcggcgccgga
cccgacgagcacgaggcgaccgtgctgcgcgaggcgttcgacgccgtgcgcgccgacgac
gccgtgcgggaggtggcccggtga
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