Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_2520
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Entry
SHJGH_2520 CDS
T02531
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sho
Streptomyces hygroscopicus subsp. jinggangensis TL01
Pathway
sho03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SHJGH_2520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sho03400
]
SHJGH_2520
Enzymes [BR:
sho01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SHJGH_2520
DNA repair and recombination proteins [BR:
sho03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SHJGH_2520
Prokaryotic type
SHJGH_2520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AGF62186
LinkDB
All DBs
Position
complement(2958225..2958908)
Genome browser
AA seq
227 aa
AA seq
DB search
MTDIAMLPESWRGVLGDELQQPYFKELTEFVEEERARGPVYPPREEVFAALDATPYEQVK
VLVLGQDPYHGEGQGHGLCFSVRPGVKTPPSLRNIYKEMQQELGLPVPDNGYLMPWARQG
VLLLNAVLTVRAGEANSHKGKGWEKFTDAVIRAVASRPDPAVFVLWGNYAQKKLPLIDET
RHVVVKGAHPSPLSAKKFFGSRPFTQINEAIAAQGHEPIDWRIPNLG
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacatcgccatgctgcccgagtcctggcgcggggttctgggcgacgagctgcag
cagccctacttcaaggagctgaccgagttcgtcgaggaggagcgggcgaggggtcccgtc
tacccgccgcgcgaggaggtcttcgccgcgctggacgccacgccgtacgagcaggtgaag
gtcctggtcctgggccaggacccgtaccacggcgagggccagggccacggcctgtgcttc
tcggtccgccccggcgtgaagaccccgccctccctgcggaacatctacaaggagatgcag
caggagctgggcctgcccgtcccggacaacggctatctgatgccgtgggcccggcagggc
gtgctgctgctcaacgcggtcctcacggtccgggccggcgaggccaactcgcacaagggc
aagggctgggagaagttcacggacgcggtgatccgcgcggtggcctcccggcccgacccg
gccgtcttcgtcctgtggggcaactacgcgcagaagaagctcccgctgatcgacgagacc
cggcacgtggtggtcaagggcgcgcacccctcgccgctgtccgcgaagaagttcttcggc
tcccgcccgttcacgcagatcaacgaggcgatcgccgcgcaggggcacgagccgatcgac
tggcgcatcccgaacctgggctga
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integrated database retrieval system
