Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_3172
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Entry
SHJGH_3172 CDS
T02531
Name
(GenBank) hypothetical protein
KO
K06958
RNase adapter protein RapZ
Organism
sho
Streptomyces hygroscopicus subsp. jinggangensis TL01
Brite
KEGG Orthology (KO) [BR:
sho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sho03019
]
SHJGH_3172
Messenger RNA biogenesis [BR:
sho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SHJGH_3172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
Motif
Other DBs
NCBI-ProteinID:
AGF62838
LinkDB
All DBs
Position
complement(3662399..3663508)
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AA seq
369 aa
AA seq
DB search
MTEHDAEPTAQRDQAHSGTGDDVARHDTGRDTARPDTGRDTARPETGRDTGRPGTDQDTG
QNTGQDNGAQVSTGSETAGVPEAAIPELVIISGMSGAGRSTAAKCLEDLGWFVVDNLPPA
LIPTMVELGARSQGNVARIAVVVDVRGRRFFDNLRESLADLDTRGVTRRIVFLESSDEAL
VRRFESVRRPHPLQGDGRIVDGIAAERELLRELRGDADLVIDTSSLNVHELRAKMDAQFA
GEEEPELRATVMSFGFKYGLPVDADLVADMRFLPNPHWVPELRPYTGLNEEVAAYVFNQP
GAKEFLDRYAELLRLIAAGYRREGKRYVTIAIGCTGGKHRSVAMSEKLAARLAAEGVETV
VVHRDMGRE
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagcacgacgcagagcccacagcacagcgagatcaggcgcacagcggcacgggc
gacgatgtcgcccggcacgacaccggccgggacaccgcccggcccgacaccggccgggac
accgcccggcccgagaccggccgggacaccggccggcccggcaccgaccaggacaccgga
cagaacaccggtcaggacaacggagcacaggtgagtacgggcagcgagacagccggggtc
cccgaggcggccatccccgagctggtgatcatctccggcatgtccggggccggccggtcc
acggcggcgaagtgtctggaggacctcggctggttcgtcgtcgacaacctcccgcccgcc
ctcatccccaccatggtggagctgggagcccgctcccagggcaacgtggcgcggatcgcg
gtcgtcgtggacgtgcgcggccggcgcttcttcgacaacctgcgcgagtccctcgccgac
ctggacacccggggcgtcacccggcggatcgtcttccttgagtcctccgacgaggcactg
gtccgccgcttcgagtcggtgcgccgcccgcacccgctccagggcgacggacgcatcgtg
gacggcatcgccgccgagcgggaactgctgcgcgagctgcgcggcgacgccgacctggtg
atcgacacctccagcctcaacgtgcacgagctgcgcgccaagatggacgcccagttcgcc
ggcgaggaggagcccgagctgcgggccaccgtgatgtccttcggcttcaagtacggcctc
ccggtcgacgccgatctggtcgcggacatgcggttcctgcccaacccgcactgggtcccg
gagctgcgcccctacaccggcctcaacgaggaggtcgccgcctacgtcttcaaccagccc
ggtgcgaaggagttcctcgaccggtacgccgaactgctgcggctcatcgcggccggctac
cggcgcgagggcaagcggtatgtgaccatcgccatcggctgtaccggcggcaagcaccgc
tcggtcgcgatgtcggagaagctcgccgcgcgcctcgcggccgagggcgtggagacggtg
gtcgtgcaccgggacatgggacgggaatga
DBGET
integrated database retrieval system
