Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_3241
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Entry
SHJGH_3241 CDS
T02531
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sho
Streptomyces hygroscopicus subsp. jinggangensis TL01
Pathway
sho03030
DNA replication
sho03410
Base excision repair
sho03420
Nucleotide excision repair
sho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SHJGH_3241
03410 Base excision repair
SHJGH_3241
03420 Nucleotide excision repair
SHJGH_3241
03440 Homologous recombination
SHJGH_3241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sho03032
]
SHJGH_3241
03400 DNA repair and recombination proteins [BR:
sho03400
]
SHJGH_3241
Enzymes [BR:
sho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SHJGH_3241
DNA replication proteins [BR:
sho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SHJGH_3241
DNA repair and recombination proteins [BR:
sho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SHJGH_3241
NER (nucleotide excision repair)
GGR (global genome repair) factors
SHJGH_3241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
HHH_2
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
AGF62906
LinkDB
All DBs
Position
complement(3735123..3737849)
Genome browser
AA seq
908 aa
AA seq
DB search
MAETASKQTDKTPGGSRPRLMLMDGHSLVYRAFFALPAENFTTATGQPTNAIYGFASMLA
NTLRDEAPTHFAVAFDVSRKTWRSERFTEYKANRSKTPDEFKGQVELIGELLDAMHAHRF
AVEGYEADDIIATLATQAEAEGFEVLIVTGDRDSFQLVSEHTTVLYPTKGVSELTRFTPE
KVFEKYGLTPAQYPDFAALRGDPSDNLPGIPGVGEKTAAKWINQFGSFAELVERVEEVKG
KAGQNLRDHLESVKLNRLLTELERQVELPKAVADLERAPYDRKAVAMVLDTLEIRNPSLR
ERLFAVDPGTEEAEATPITTDGVEIDGAILRTGELAPWLAEHGAGPLGVATVDTWALGAG
SVAEVALAAAGGAAAWFDPSELDEADENAFAAWLADAARPKVFHNAKGAMRVFAEHGWSV
EGVRMDTALAAYLVKPGRRSFDLDALSMEYLHRELAPAAAADGQLAFGADDGAEAEALMV
QARAVLDLGTAFEGRLEEVGAADLLRDMELPTSALLARMERHGIAADRPHLEAMEQMFAG
AVQQAVKEAHAAAGHEFNLGSPKQLQEVLFGELALPKTKKTKTGYTTDADALAWLATQTD
NELPVIMLRHREQAKLRVTVEGLIKTIAGDGRIHTTFNQTVAATGRLSSTDPNLQNIPVR
TDEGRAIRRGFVVGEGFESLMTADYSQIELRVMAHLSEDAGLIEAFTSGEDLHTTAASRV
FGVEPGAVDAEMRRKIKAMSYGLAYGLSAFGLSQQLNIEAAEARALMDAYFERFGGVRDY
LRRAVDEARATGYTATLFGRRRYLPDLNSDNRQRREAAERMALNAPIQGTAADIVKIAML
KVDSALREADLRSRMLLQVHDEIVLEIAPGERAAAEEIVRREMAGAVQLRAPLDVSVGVG
PDWESAAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
gtggcagagacagcatcgaagcagaccgacaagacccccggcggctcccgtccccggctg
atgctcatggacgggcactcgctggtctaccgcgcgttcttcgcgctgcccgcggagaac
ttcacgaccgcgaccggccagccgacgaacgcgatctacggcttcgcgtcgatgctggcc
aacaccctgcgtgacgaggcgcccacgcacttcgcggtggctttcgacgtctcccgcaag
acctggcgctccgagcggttcaccgagtacaaggcgaaccgctccaagaccccggacgag
ttcaagggccaggtcgagctgatcggcgagctgctcgacgcgatgcacgcgcaccgcttc
gccgtcgagggctacgaggcggacgacatcatcgccaccctcgccacccaggccgaggcc
gagggcttcgaggtgctgatcgtcaccggcgaccgcgactccttccagctggtcagcgag
cacaccaccgtgctctacccgaccaagggcgtctcggagctgacccgcttcaccccggag
aaggttttcgagaagtacggattgacgcctgcccagtacccggacttcgcggctctgcgc
ggcgacccgtccgacaacctccccggcatccccggggtcggcgagaagaccgccgcgaag
tggatcaaccagttcggctccttcgccgagctggtcgagcgggtggaggaggtcaagggc
aaggccgggcagaacctccgcgaccacctggagtccgtcaagctcaaccgcctcctcacc
gagctggaacgccaggtggagctgccgaaggcggtcgccgacctggagcgggccccgtac
gaccgcaaggccgtcgcgatggtcctggacaccctggagatccgcaacccgtcgctgcgc
gagcggctcttcgccgtcgaccccggcacggaggaggccgaggccaccccgatcaccacc
gacggcgtcgagatcgacggcgccatcctgcgcaccggcgagctggccccctggctcgcc
gagcacggcgccggccccctgggcgtcgccaccgtcgacacctgggcgctgggcgccggc
tcggtcgccgaggtcgccctcgccgcggccgggggagcggcggcctggttcgacccgtcg
gagctggacgaggccgacgagaacgccttcgccgcctggctggccgacgcggcccgcccc
aaggtgttccacaacgccaagggcgccatgcgggtcttcgccgagcacggctggagcgtc
gagggcgtgcgcatggacaccgcgctcgccgcctacctggtcaagcccggccgccgctcc
ttcgacctggacgcgctgtcgatggagtacctgcaccgcgagctggcccccgccgcggcg
gccgacggccagctggccttcggcgcggacgacggcgccgaggccgaggccctgatggtc
caggcccgcgccgtcctggacctcggcacggccttcgagggccgcctggaggaggtcggc
gccgccgacctgctgcgcgacatggagctgcccacctccgcgctgctcgcccgcatggag
cgccacggcatcgcggcggaccggccgcacctcgaagcgatggagcagatgttcgcgggc
gccgtgcagcaggccgtgaaggaggcgcacgcggcggccggccacgagttcaacctcggc
tcgcccaagcagctccaggaggtcctcttcggcgagctggccctgccgaagacgaagaag
accaagaccggctacaccacggacgccgacgccctggcctggctcgccacccagaccgac
aacgaactgcccgtgatcatgctccggcaccgcgagcaggccaagctgcgggtgaccgtc
gagggcctgatcaagaccatcgcgggggacggccgcatccacaccaccttcaaccagacg
gtggccgcgaccgggcgtctgtcctccaccgaccccaacctccagaacatccccgtccgc
acggacgagggccgggcgatccgccggggcttcgtggtcggcgagggcttcgagtccctg
atgaccgcggactacagccagatcgaactgcgcgtcatggcccacctctccgaggacgcg
ggcctgatcgaggcgttcacctccggcgaggacctgcacaccaccgccgcctcccgggtg
ttcggcgtcgagcccggcgcggtcgacgccgagatgcgccgcaagatcaaggcgatgtcg
tacggcctcgcgtacggcctgtccgcgttcggcctctcccagcagctgaacatcgaggcg
gccgaggcccgcgccctgatggacgcctacttcgagcgcttcggcggggtgcgggactat
ctgcgccgggcggtcgacgaggcccgggcgacgggctacaccgcgacgctcttcgggcgc
cgccgctacctgcccgacctcaacagcgacaaccgccagcgccgcgaggcggccgagcgc
atggccctcaacgcgcccatccagggcacggcggcggacatcgtgaagatcgccatgctc
aaggtggacagcgcgctgcgggaggcggacctcaggtcccgcatgctcctccaggtgcac
gacgagatcgtgctggagatcgcccccggcgagcgggcggcggcggaggagatcgtccgc
cgcgaaatggcgggcgccgtgcagctcagggccccgctggacgtctcggtgggcgtgggc
ccggactgggaatcggcggcccactag
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